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@Crivella
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This should make the hook work again after $EBROOTXXX is not what is being checked anymore directly in the Easyblock after

This should always work as we are enforcing not doing any configure specific action in the __init__ to not break things with bundles and we are still checking $EBROOTXXX to get the actual paths to the libraries (just not to see if they are a dependency)

https://github.com/easybuilders/easybuild-easyblocks/blob/2a7aad714fef75e88297498dbb7cf040c8202667/easybuild/easyblocks/l/llvm.py#L531-L533

@bedroge
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bedroge commented Oct 24, 2025

LLVM 20.1.7 failed in EESSI/software-layer#1257 (comment), so let's verify that it works now.

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

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eessi-bot-aws bot commented Oct 24, 2025

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.10/pr_115/98906

date job status comment
Oct 24 08:56:29 UTC 2025 submitted job id 98906 awaits release by job manager
Oct 24 08:56:49 UTC 2025 released job awaits launch by Slurm scheduler
Oct 24 08:57:51 UTC 2025 running job 98906 is running
Oct 25 11:05:28 UTC 2025 finished
🤷 UNKNOWN (click triangle for detailed information)
  • Job results file _bot_job98906.result does not exist in job directory or reading it failed.
  • No artefacts were found/reported.
Oct 25 11:05:28 UTC 2025 test result
🤷 UNKNOWN (click triangle for detailed information)
  • Job test file _bot_job98906.test does not exist in job directory or reading it failed.

@bedroge
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bedroge commented Oct 25, 2025

The job has been running for almost a day, Slurm has restarted it 5 times for some reason. I suspect that it may run out of memory? I've cancelled the job, otherwise it probably just keeps running.

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bedroge commented Oct 25, 2025

Let's try again with fewer cores (and hence less memory):

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

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eessi-bot-aws bot commented Oct 25, 2025

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.10/pr_115/99219

date job status comment
Oct 25 15:09:47 UTC 2025 submitted job id 99219 awaits release by job manager
Oct 25 15:10:30 UTC 2025 released job awaits launch by Slurm scheduler
Oct 25 15:15:14 UTC 2025 running job 99219 is running
Oct 25 23:29:55 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-99219.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-x86_64-amd-zen2-17614340280.tar.gzsize: 1 MiB (1610822 bytes)
entries: 286
modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all
lit/18.1.8-GCCcore-14.2.0.lua
psutil/7.0.0-GCCcore-14.2.0.lua
software under 2025.06/software/linux/x86_64/amd/zen2/software
lit/18.1.8-GCCcore-14.2.0
psutil/7.0.0-GCCcore-14.2.0
reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod
lit/18.1.8-GCCcore-14.2.0/20251025_151629UTC
psutil/7.0.0-GCCcore-14.2.0/
psutil/7.0.0-GCCcore-14.2.0/20251025_151555UTC
other under 2025.06/software/linux/x86_64/amd/zen2
2025.06/init/easybuild/eb_hooks.py
Oct 25 23:29:55 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 0/0 test case(s) from 0 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-99219.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@bedroge
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bedroge commented Oct 26, 2025

The original issue has been solved (failure in the build step), but the build now fails in the test step:

== FAILED: Installation ended unsuccessfully: An error was raised during test step: 'Too many failed tests: 176 (10 allowed)' (took 7 hours 51 mins 38 secs)

The build log has lots of the following errors:

ld.lld: error: unable to find library -lgcc_s
ld.lld: error: unable to find library -lgcc_s
    ld.lld: error: unable to find library -lstdc++
    ld.lld: error: unable to find library -lgcc_s
    ld.lld: error: unable to find library -lgcc_s
    ld.lld: error: unable to find library -lstdc++
    ld.lld: error: unable to find library -lgcc_s
    ld.lld: error: unable to find library -lgcc_s
Testing Time: 7651.34s

Total Discovered Tests: 140058
  Skipped          :     25 (0.02%)
  Unsupported      :   5498 (3.93%)
  Passed           : 134062 (95.72%)
  Expectedly Failed:    277 (0.20%)
  Failed           :    196 (0.14%)

@Crivella
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Looking into it.
Fix for it will probably be on the EB side

@Crivella
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Crivella commented Oct 27, 2025

So this is apparently due to LIBRARY_PATH being (SILENTLY and after config files are loaded) filtered out in lit tests

https://github.com/llvm/llvm-project/blob/6146a88f60492b520a36f8f8f3231e15f3cc6082/llvm/utils/lit/lit/llvm/config.py#L540

This was not previously an Issue (for 2023.06 as we have the GCCcore module without a set LIBRARY_PATH) which was allowing this fix to kick in (manually adding the -L to the GCC library in the compiler config files)

https://github.com/easybuilders/easybuild-easyblocks/blob/2a7aad714fef75e88297498dbb7cf040c8202667/easybuild/easyblocks/l/llvm.py#L1074-L1082

Possible solutions (@boegel @Thyre ideas?):

  • patching the LIBRARY_PATH filtering by commenting it in the list: I am currently re-running the tests with this. Could still have trouble on systems that sets LIBRARY_PATH by default before loading modules
  • Change the fix in the easyblock to always add the -L to GCC libraries even if it is already in LIBRARY_PATH: could cause trouble if people want to use LIBRARY_PATH to some other GCC installation as i expect the CLI to take precedence over the ENV (not tested yet). I do feel this would be a very niche problem...

PS: I guess we have been adding LIBRARY_PATH to the GCC module files since
easybuilders/easybuild-easyblocks@adf3b83

@Crivella
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Crivella commented Oct 27, 2025

Results by re-running the test suite manually

Tests ran normally in EB (190 failures with 18 ignored)

********************
Failed Tests (190):
  BOLT :: AArch64/check-init-not-moved.s
  BOLT :: R_ABS.pic.lld.cpp
  BOLT :: X86/dwarf5-df-inlined-subroutine-gc-sections-range.test
  BOLT :: X86/dwarf5-dwarf4-types-backward-forward-cross-reference.test
  BOLT :: X86/dwarf5-locexpr-referrence.test
  BOLT :: X86/indirect-goto-pie.test
  BOLT :: assume-abi.test
  BOLT :: bad-exe.test
  BOLT :: bolt-icf.test
  BOLT :: bolt-info.test
  BOLT :: cache+-deprecated.test
  BOLT :: eh-frame-hdr.test
  BOLT :: eh-frame-overwrite.test
  BOLT :: invalid-profile.test
  BOLT :: keep-aranges.test
  BOLT :: lsda-section-name.cpp
  BOLT :: max-funcs.test
  BOLT :: no-relocs.test
  BOLT :: non-empty-debug-line.test
  BOLT :: permission.test
  BOLT :: pie.test
  BOLT :: re-optimize.test
  BOLT :: runtime/X86/asm-dump.c
  BOLT :: runtime/X86/basic-instrumentation.test
  BOLT :: runtime/X86/exceptions-lpstart-zero.s
  BOLT :: runtime/X86/exceptions-pic.test
  BOLT :: runtime/X86/exceptions-run.test
  BOLT :: runtime/X86/fdata-escape-chars.ll
  BOLT :: runtime/X86/fix-branches-jrcxz.s
  BOLT :: runtime/X86/gotoff-large-code-model-2.s
  BOLT :: runtime/X86/gotoff-large-code-model.s
  BOLT :: runtime/X86/hot-end-symbol.s
  BOLT :: runtime/X86/hugify.c
  BOLT :: runtime/X86/instrumentation-dup-jts.s
  BOLT :: runtime/X86/instrumentation-ind-calls.s
  BOLT :: runtime/X86/instrumentation-indirect.c
  BOLT :: runtime/X86/instrumentation-pie.c
  BOLT :: runtime/X86/instrumentation-shlib.c
  BOLT :: runtime/X86/instrumentation-tail-call.s
  BOLT :: runtime/X86/instrumentation-xmm.c
  BOLT :: runtime/X86/internal-call-instrument.test
  BOLT :: runtime/X86/internal-call.test
  BOLT :: runtime/X86/lp-fragment-start.s
  BOLT :: runtime/X86/pie-exceptions-split.test
  BOLT :: runtime/X86/reg-reassign-no-swap-bl.s
  BOLT :: runtime/X86/reg-reassign-swap-cold.s
  BOLT :: runtime/X86/rethrow.cpp
  BOLT :: runtime/X86/retpoline-synthetic.test
  BOLT :: runtime/X86/section-order.test
  BOLT :: runtime/X86/section-reloc-with-addend.s
  BOLT :: runtime/X86/shrinkwrapping-alignment.s
  BOLT :: runtime/X86/shrinkwrapping-lock.s
  BOLT :: runtime/X86/shrinkwrapping-pushpop.s
  BOLT :: runtime/X86/tail-duplication-constant-prop.s
  BOLT :: runtime/X86/three-way-branch-pass.s
  BOLT :: runtime/X86/unclaimed-jt-entries.s
  BOLT :: runtime/X86/user-func-reorder.c
  BOLT :: runtime/bolt-reserved.cpp
  BOLT :: runtime/exceptions-instrumentation.test
  BOLT :: runtime/exceptions-no-pie.cpp
  BOLT :: runtime/exceptions-plt.cpp
  BOLT :: runtime/fptr.test
  BOLT :: runtime/instrumentation-indirect-2.c
  BOLT :: runtime/iplt.c
  BOLT :: runtime/mark-funcs.c
  BOLT :: runtime/pie-exceptions-split.test
  BOLT :: runtime/plt-gnu-ld.test
  BOLT :: runtime/plt-lld.test
  BOLT :: shared-object.test
  BOLT :: timers.c
  BOLT :: unreadable-profile.test
  BOLT :: verify-cfg.test
  BOLT :: yaml-profile-kind.c
  BOLT-Unit :: Core/./CoreTests/failed_to_discover_tests_from_gtest
  Clang :: Driver/baremetal.cpp
  Clang :: Driver/csky-toolchain.c
  Clang :: Driver/freebsd-include-paths.c
  Clang :: Driver/haiku.c
  Clang :: Driver/hexagon-toolchain-elf.c
  Clang :: Driver/hexagon-toolchain-linux.c
  Clang :: Driver/mips-cs.cpp
  Clang :: Driver/mips-fsf.cpp
  Clang :: Driver/mips-img-v2.cpp
  Clang :: Driver/mips-img.cpp
  Clang :: Driver/riscv32-toolchain-extra.c
  Clang :: Driver/riscv64-toolchain-extra.c
  Clang :: Driver/rocm-detect.hip
  Clang :: Frontend/warning-poison-system-directories.c
  Flang :: Driver/config-file.f90
  Flang :: Driver/gcc-toolchain-install-dir.f90
  Flang :: Driver/missing-input.f90
  lldb-shell :: Breakpoint/dummy-target.test
  lldb-shell :: Breakpoint/invalid-condition.test
  lldb-shell :: Commands/command-breakpoint-col.test
  lldb-shell :: Commands/command-disassemble-mixed.c
  lldb-shell :: Commands/command-disassemble-mixed.test
  lldb-shell :: Commands/command-expr-diagnostics.test
  lldb-shell :: Commands/command-image-lookup-color.test
  lldb-shell :: Commands/command-process-launch-user-entry.test
  lldb-shell :: Commands/command-stop-hook-no-target.test
  lldb-shell :: Commands/command-thread-backtrace.test
  lldb-shell :: Commands/command-thread-select.test
  lldb-shell :: Commands/command-thread-siginfo.test
  lldb-shell :: Commands/command-wrong-subcommand-error-msg.test
  lldb-shell :: Driver/CommandOnCrashMultiThreaded.test
  lldb-shell :: Driver/TestEmptyArgument.test
  lldb-shell :: Driver/TestPositionalArgs.test
  lldb-shell :: Driver/TestSingleQuote.test
  lldb-shell :: Driver/TestTarget.test
  lldb-shell :: Error/cleanup.cpp
  lldb-shell :: ExecControl/StopHook/stop-hook.test
  lldb-shell :: Expr/TestAnonNamespaceParamFunc.cpp
  lldb-shell :: Expr/TestExited.test
  lldb-shell :: Expr/TestIRMemoryMap.test
  lldb-shell :: Expr/TestStringLiteralExpr.test
  lldb-shell :: ObjectFile/ELF/minidebuginfo-set-and-hit-breakpoint.test
  lldb-shell :: Process/TestEnvironment.test
  lldb-shell :: Process/UnsupportedLanguage.test
  lldb-shell :: Register/x86-64-fp-read.test
  lldb-shell :: Register/x86-64-fp-write.test
  lldb-shell :: Register/x86-64-gp-read.test
  lldb-shell :: Register/x86-64-gp-write.test
  lldb-shell :: Register/x86-64-read.test
  lldb-shell :: Register/x86-64-write.test
  lldb-shell :: Register/x86-64-ymm-read.test
  lldb-shell :: Register/x86-64-ymm-write.test
  lldb-shell :: Register/x86-fp-write.test
  lldb-shell :: Register/x86-mm-xmm-read.test
  lldb-shell :: Register/x86-mm-xmm-write.test
  lldb-shell :: Register/x86-multithread-read.test
  lldb-shell :: Register/x86-multithread-write.test
  lldb-shell :: Settings/TestFrameFormatColor.test
  lldb-shell :: Settings/TestFrameFormatMangling.test
  lldb-shell :: Settings/TestFrameFormatName.test
  lldb-shell :: Settings/TestFrameFormatNoColor.test
  lldb-shell :: Settings/TestLineMarkerColor.test
  lldb-shell :: Subprocess/clone-follow-child-softbp.test
  lldb-shell :: Subprocess/clone-follow-child-wp.test
  lldb-shell :: Subprocess/clone-follow-child.test
  lldb-shell :: Subprocess/clone-follow-parent-softbp.test
  lldb-shell :: Subprocess/clone-follow-parent-wp.test
  lldb-shell :: Subprocess/clone-follow-parent.test
  lldb-shell :: Subprocess/fork-follow-child-softbp.test
  lldb-shell :: Subprocess/fork-follow-child-wp.test
  lldb-shell :: Subprocess/fork-follow-child.test
  lldb-shell :: Subprocess/fork-follow-parent-softbp.test
  lldb-shell :: Subprocess/fork-follow-parent-wp.test
  lldb-shell :: Subprocess/fork-follow-parent.test
  lldb-shell :: Subprocess/vfork-follow-child-softbp.test
  lldb-shell :: Subprocess/vfork-follow-child-wp.test
  lldb-shell :: Subprocess/vfork-follow-child.test
  lldb-shell :: Subprocess/vfork-follow-parent-softbp.test
  lldb-shell :: Subprocess/vfork-follow-parent-wp.test
  lldb-shell :: Subprocess/vfork-follow-parent.test
  lldb-shell :: SymbolFile/DWARF/DW_OP_piece-O3.c
  lldb-shell :: SymbolFile/DWARF/clang-gmodules-type-lookup.c
  lldb-shell :: SymbolFile/DWARF/debug-types-expressions.test
  lldb-shell :: SymbolFile/DWARF/delayed-definition-die-searching.test
  lldb-shell :: SymbolFile/DWARF/dwarf5-lazy-dwo.c
  lldb-shell :: SymbolFile/DWARF/dwo-debug-file-search-path-symlink-relative-compdir.c
  lldb-shell :: SymbolFile/DWARF/dwo-debug-file-search-paths-dwoname-absolute-compdir.c
  lldb-shell :: SymbolFile/DWARF/dwo-debug-file-search-paths-filename-only-absolute-compdir.c
  lldb-shell :: SymbolFile/DWARF/dwo-debug-file-search-paths-filename-only-relative-compdir.c
  lldb-shell :: SymbolFile/DWARF/dwo-debug-file-search-paths-relative-compdir.c
  lldb-shell :: SymbolFile/DWARF/dwo-missing-error.test
  lldb-shell :: SymbolFile/DWARF/dwo-relative-filename-only-binary-dir.c
  lldb-shell :: SymbolFile/DWARF/dwo-static-data-member-access.test
  lldb-shell :: SymbolFile/DWARF/packed.cpp
  lldb-shell :: SymbolFile/DWARF/split-dwarf-expression-eval-bug.cpp
  lldb-shell :: SymbolFile/DWARF/vla.cpp
  lldb-shell :: SymbolFile/DWARF/x86/DW_TAG_GNU_call_site-DW_AT_low_pc.s
  lldb-shell :: SymbolFile/DWARF/x86/DW_TAG_variable-DW_AT_decl_file-DW_AT_abstract_origin-crosscu1.s
  lldb-shell :: SymbolFile/NativePDB/lookup-by-types.cpp
  lldb-shell :: SymbolFile/OnDemand/source-breakpoint.test
2 warning(s) in tests

  lldb-shell :: SymbolFile/OnDemand/symbolic-breakpoint.test
  lldb-shell :: SymbolFile/checksum-mismatch.test
  lldb-shell :: SymbolFile/target-symbols-add-unwind.test
  lldb-shell :: Unwind/basic-block-sections.test
  lldb-shell :: Unwind/eh-frame-augment-noop.test
  lldb-shell :: Unwind/eh-frame-dwarf-unwind-abort.test
  lldb-shell :: Unwind/eh-frame-dwarf-unwind.test
  lldb-shell :: Unwind/eh-frame-small-fde.test
  lldb-shell :: Unwind/prefer-debug-over-eh-frame.test
  lldb-shell :: Unwind/split-machine-functions.test
  lldb-shell :: Unwind/thread-step-out-ret-addr-check.test
  lldb-shell :: Unwind/trap_frame_sym_ctx.test
  lldb-shell :: Unwind/unwind-plan-dwarf-dump.test
  lldb-shell :: Watchpoint/ExpressionLanguage.test
  lldb-shell :: Watchpoint/SetErrorCases.test
  llvm-libc++-shared.cfg.in :: std/time/time.zone/time.zone.timezone/time.zone.members/sys_info.zdump.pass.cpp


Testing Time: 3136.64s

Total Discovered Tests: 140058
  Skipped          :     25 (0.02%)
  Unsupported      :   5496 (3.92%)
  Passed           : 134070 (95.72%)
  Expectedly Failed:    277 (0.20%)
  Failed           :    190 (0.14%)

Tests ran manually with the the `env.sh` from the EB test command + removing the filtering of LIBRARY_PATH (23 failures with 18 that will be ignored

2 warning(s) in tests
********************
Failed Tests (23):
  BOLT :: AArch64/check-init-not-moved.s
  BOLT :: X86/dwarf5-dwarf4-types-backward-forward-cross-reference.test
  BOLT :: X86/dwarf5-locexpr-referrence.test
  BOLT-Unit :: Core/./CoreTests/failed_to_discover_tests_from_gtest
  Clang :: Driver/Xlinker-args.c
  Clang :: Driver/baremetal.cpp
  Clang :: Driver/csky-toolchain.c
  Clang :: Driver/freebsd-include-paths.c
  Clang :: Driver/haiku.c
  Clang :: Driver/hexagon-toolchain-elf.c
  Clang :: Driver/hexagon-toolchain-linux.c
  Clang :: Driver/mips-cs.cpp
  Clang :: Driver/mips-fsf.cpp
  Clang :: Driver/mips-img-v2.cpp
  Clang :: Driver/mips-img.cpp
  Clang :: Driver/riscv32-toolchain-extra.c
  Clang :: Driver/riscv64-toolchain-extra.c
  Clang :: Driver/rocm-detect.hip
  Clang :: Frontend/warning-poison-system-directories.c
  Flang :: Driver/config-file.f90
  Flang :: Driver/gcc-toolchain-install-dir.f90
  Flang :: Driver/missing-input.f90
  llvm-libc++-shared.cfg.in :: std/time/time.zone/time.zone.timezone/time.zone.members/sys_info.zdump.pass.cpp


Testing Time: 1696.36s

Total Discovered Tests: 139693
  Skipped          :     25 (0.02%)
  Unsupported      :   5394 (3.86%)
  Passed           : 133975 (95.91%)
  Expectedly Failed:    276 (0.20%)
  Failed           :     23 (0.02%)

For the manual one the failed tests seems to mostly be the stuff we usually ignore

Ignored tests from the EB report

== 2025-10-24 17:28:46,830 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/baremetal.cpp (11248 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/csky-toolchain.c (11333 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/freebsd-include-paths.c (11558 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/haiku.c (11610 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/hexagon-toolchain-elf.c (11623 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/hexagon-toolchain-linux.c (11626 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/mips-cs.cpp (11802 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/mips-fsf.cpp (11806 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/mips-img-v2.cpp (11809 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/mips-img.cpp (11810 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/riscv32-toolchain-extra.c (12098 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/riscv64-toolchain-extra.c (12101 of 105625)
== 2025-10-24 17:28:46,831 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Driver/rocm-detect.hip (12105 of 105625)
== 2025-10-24 17:28:46,832 llvm.py:1317 INFO Ignoring test failure: FAIL: Clang :: Frontend/warning-poison-system-directories.c (12652 of 105625)
== 2025-10-24 17:28:46,836 llvm.py:1317 INFO Ignoring test failure: FAIL: Flang :: Driver/config-file.f90 (23215 of 105625)
== 2025-10-24 17:28:46,836 llvm.py:1317 INFO Ignoring test failure: FAIL: Flang :: Driver/gcc-toolchain-install-dir.f90 (23275 of 105625)
== 2025-10-24 17:28:46,836 llvm.py:1317 INFO Ignoring test failure: FAIL: Flang :: Driver/missing-input.f90 (23302 of 105625)
== 2025-10-24 17:28:46,867 llvm.py:1317 INFO Ignoring test failure: FAIL: llvm-libc++-shared.cfg.in :: std/time/time.zone/time.zone.timezone/time.zone.members/sys_info.zdump.pass.cpp (104099 of 105625)

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