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distance results codes
Statistics are stored in the Distance project using a series of numeric codes. This is a quick guide to interpreting these codes.
Codes are 4 digits
- a "module" code
- ??? (always zero?)
- a "statistic" code
- "type" of statistic
Look-up for 1. and 3. is in the tables below.
Taken from the Distance for Windows user manual (p 322-323):
| Module code | Module | Statistic code | statistic |
|---|---|---|---|
| 1 | encounter rate | 1 | number of observations (n) |
| 2 | number of samples (k) | ||
| 3 | effort (L or K or T) | ||
| 4 | encounter rate (n/L or n/K or n/T) | ||
| 5 | left truncation distance | ||
| 6 | right truncation distance (w) | ||
| 2 | detection probability | 1 | total number of parameters (m) |
| 2 | AIC value | ||
| 3 | chi-square test probability | ||
| 4 | f(0) or h(0)^1 | ||
| 5 | probability of detection (Pw)^1 | ||
| 6 | effective strip width/detection radius (ESW/EDR)^1 | ||
| 7 | AICc | ||
| 8 | BIC | ||
| 9 | Log likelihood | ||
| 10 | Kolmogorov-Smirnov test probability | ||
| 11 | Cramér-von Mises (uniform weighting) test probability | ||
| 12 | Cramér-von Mises (cosine weighting) test probability | ||
| 13 | key function type^2 | ||
| 14 | adjustment series type^3 | ||
| 15 | number of key function parameters (NKP) | ||
| 16 | number of adjustment term parameters (NAP) | ||
| 17 | number of covariate parameters (NCP) | ||
| 101 ... (100+m) | estimated value of each parameter^5 | ||
| 3 | cluster size | 1 | average cluster size^1 |
| 2 | size-bias regression correlation ( r) | ||
| 3 | p-value for correlation significance (r-p) | ||
| 4 | estimate of expected cluster size corrected for size bias^1 | ||
| 4 | density/abudance | 1 | density of clusters (or animal density if non-clustered)^1 |
| 2 | density of animals^1 | ||
| 3 | number of animals, if survey area is specified^1 | ||
| 4 | bootstrap density of clusters^14 | ||
| 5 | bootstrap density of animals^14 | ||
| 6 | bootstrap number of animals^14 |
Footnotes:
- Values for CV, LCL, UCL and DF are included for these statistics.
- Key function types are:
- uniform
- half-normal
- negative exponential
- hazard rate
- Adjustment series types are:
- simple polynomial
- Hermite polynomial
- cosine
- Bootstrap CV calculated as bootstrap SE / bootstrap point estimate; df field here is the number of bootstraps
- Statistic 101 corresponds with the parameter identified as A(1) in the results, 102 with A(2), etc.
The table "ProjectSettings" provides the following information:
| Key | Setting |
|---|
1 | Number of sampler points
100 | Mean coverage probability 1000 | AIC - (minimum AIC), calculated within survey and data filter 1001 | AICc - (minimum AICc), calculated within survey and data filter 1002 | BIC - (minimum BIC), calculated within survey and data filter 1003 | LogL - (minimum LogL), calculated within survey and data filter 101 | Minimum coverage probability 1010 | Number of observations 102 | Maximum coverage probability 1020 | Number of samples 103 | Standard deviation of coverage probability 1030 | Total survey effort 1040 | Encounter rate 1041 | Encounter rate coeff. of var. 1042 | Encounter rate lower conf. limit 1043 | Encounter rate upper conf. limit 1044 | Encounter rate degrees of freedom 2 | Number of sampler points 2010 | Total number of parameters 2020 | Akaike Information Criterion (AIC) value 2030 | Goodness-of-fit chi-square test probability (test 1, after pooling) 2040 | Probability density function (line transects) or slope of the pdf (point transects) at x=0 2050 | Probability of detection 2051 | Probability of detection coeff. of var. 2052 | Probability of detection lower conf. limit 2053 | Probability of detection upper conf. limit 2054 | Probability of detection degrees of freedom 2060 | Effective strip width/detection radius 2061 | Effective strip width/detection radius coeff. of var. 2062 | Effective strip width/detection radius lower conf. limit 2063 | Effective strip width/detection radius upper conf. limit 2064 | Effective strip width/detection radius degrees of freedom 2070 | Small-sample adjusted Akaike Information Criterion value 2080 | Bayes' Information Criterion 2090 | Log likelihood 2100 | Goodness-of-fit Kolmogorov Smirnov test probability 2110 | Goodness-of-fit Cramer-von Mises (uniform weighting) test probability 2120 | Goodness-of-fit Cramer-von Mises (cosine weighting) test probability 2150 | Number of key function parameters 2160 | Number of adjustment term parameters 2170 | Number of covariate parameters 3 | Number of sampler lines 3010 | Mean cluster size 3011 | Mean cluster size coeff. of var. 3012 | Mean cluster size lower conf. interval 3013 | Mean cluster size upper conf. interval 3014 | Mean cluster size degrees of freedom 3020 | Size bias regression correlation coefficient 3030 | Size bias regression correlation test probability 3040 | Expected cluster size, correcting for size bias 3041 | Expected cluster size coeff. of var. 3042 | Expected cluster size lower conf. limit 3043 | Expected cluster size upper conf. limit 3044 | Expected cluster size degrees of freedom 4 | Maximum possible area coverage 4010 | Density of clusters 4011 | Density of clusters analytic coeff. of var. 4012 | Density of clusters analytic lower conf. limit 4013 | Density of clusters analytic upper conf. limit 4014 | Density of clusters degrees of freedom 4020 | Density of individuals 4021 | Density of individuals analytic coeff. of var. 4022 | Density of individuals analytic lower conf. limit 4023 | Density of individuals analytic upper conf. limit 4024 | Density of individuals degrees of freedom 4030 | Number of individuals 4031 | Number of individuals analytic coeff. of var. 4032 | Number of individuals analytic lower conf. limit 4033 | Number of individuals analytic upper conf. limit 4034 | Number of individuals analytic degrees of freedom 4040 | Density of clusters bootstrap 4041 | Density of clusters bootstrap coeff. of var. 4042 | Density of clusters bootstrap lower conf. limit 4043 | Density of clusters bootstrap upper conf. limit 4050 | Density of individuals bootstrap 4051 | Density of individuals bootstrap coeff. of var. 4052 | Density of individuals bootstrap lower conf. limit 4053 | Density of individuals bootstrap upper conf. limit 4060 | Number of individuals bootstrap 4061 | Number of individuals bootstrap coeff. of var. 4062 | Number of individuals bootstrap lower conf. limit 4063 | Number of individuals upper confidence limit 4064 | Number of bootstrap resamples 5 | Realized area coverage 5010 | Generalized cross-validation metric for DSM model 5020 | Sample size (number of segments) for DSM model 5030 | Proportion of deviance explained by DSM model 5040 | The estimated scale parameter/error variance 6 | Proportion of survey area covered 7 | Mean realized sampler line length (mean over strata)