Fixed the issue nf-core#811 and nf-core#812, which leading the pipel…

…ine break
Dedaniya08 · Dec 9, 2024 · 05000f3 · 05000f3
1 parent 8f139ce
commit 05000f3
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diff --git a/modules/local/dada2_filtntrim.nf b/modules/local/dada2_filtntrim.nf
@@ -1,6 +1,8 @@
 process DADA2_FILTNTRIM {
     tag "$meta.id"
     label 'process_medium'
+    errorStrategy 'retry'
+    maxRetries 3
 
     conda "bioconda::bioconductor-dada2=1.30.0"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

diff --git a/modules/local/rename_raw_data_files.nf b/modules/local/rename_raw_data_files.nf
@@ -1,6 +1,8 @@
 process RENAME_RAW_DATA_FILES {
     tag "$meta.id"
     label 'process_low'
+    errorStrategy 'retry'
+    maxRetries 3
 
     conda "conda-forge::sed=4.7"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?