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@DataBiosphere

Data Biosphere

We are creating a vibrant ecosystem of interoperable modules and data environments for the biomedical community.

Popular repositories Loading

  1. toil toil Public

    A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).

    Python 927 244

  2. dsub dsub Public

    Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

    Python 277 47

  3. terra-ui terra-ui Public

    Web user interface for the Terra platform

    TypeScript 54 22

  4. leonardo leonardo Public

    Notebook service

    Scala 44 21

  5. terra-docker terra-docker Public

    Python 32 35

  6. job-manager job-manager Public

    Job Manager API and UI for interacting with asynchronous batch jobs and workflows.

    TypeScript 27 5

Repositories

Showing 10 of 163 repositories
  • duos-ui Public

    Broad Institute Data Use Oversight System

    DataBiosphere/duos-ui’s past year of commit activity
    TypeScript 12 BSD-3-Clause 4 0 3 Updated Apr 2, 2026
  • DataBiosphere/terra-scientific-pipelines-service-cli’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Apr 2, 2026
  • DataBiosphere/terra-scientific-pipelines-service’s past year of commit activity
    Java 2 BSD-3-Clause 0 0 2 Updated Apr 2, 2026
  • consent Public

    Broad Institute Data Use Oversight System

    DataBiosphere/consent’s past year of commit activity
    Java 11 BSD-3-Clause 2 0 1 Updated Apr 2, 2026
  • leonardo Public

    Notebook service

    DataBiosphere/leonardo’s past year of commit activity
    Scala 44 BSD-3-Clause 21 1 10 Updated Apr 2, 2026
  • jade-data-repo Public

    The Terra Data Repository built by the Jade team.

    DataBiosphere/jade-data-repo’s past year of commit activity
    Java 13 BSD-3-Clause 5 0 3 Updated Apr 2, 2026
  • data-browser Public
    DataBiosphere/data-browser’s past year of commit activity
    Jupyter Notebook 11 Apache-2.0 5 113 28 Updated Apr 2, 2026
  • jade-data-repo-ui Public

    UI for the Jade Data Repo

    DataBiosphere/jade-data-repo-ui’s past year of commit activity
    TypeScript 4 BSD-3-Clause 1 0 5 Updated Apr 2, 2026
  • findable-ui Public
    DataBiosphere/findable-ui’s past year of commit activity
    TypeScript 1 Apache-2.0 0 74 2 Updated Apr 2, 2026
  • meta-disco Public
    DataBiosphere/meta-disco’s past year of commit activity
    Python 3 1 21 0 Updated Apr 2, 2026

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