Skip to content
@DataBiosphere

Data Biosphere

We are creating a vibrant ecosystem of interoperable modules and data environments for the biomedical community.

Popular repositories Loading

  1. toil toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 881 237

  2. dsub dsub Public

    Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

    Python 260 43

  3. terra-ui terra-ui Public

    Web user interface for the Terra platform

    TypeScript 52 22

  4. leonardo leonardo Public

    Notebook service

    Scala 42 21

  5. terra-docker terra-docker Public

    Jupyter Notebook 27 35

  6. job-manager job-manager Public

    Job Manager API and UI for interacting with asynchronous batch jobs and workflows.

    TypeScript 26 5

Repositories

Showing 10 of 159 repositories
  • azul Public

    Metadata indexer and query service used for AnVIL, HCA, LungMAP, and CGP

    DataBiosphere/azul’s past year of commit activity
    Python 5 Apache-2.0 2 729 22 Updated Jul 6, 2024
  • data-browser Public
    DataBiosphere/data-browser’s past year of commit activity
    Jupyter Notebook 11 Apache-2.0 4 91 14 Updated Jul 6, 2024
  • sync-github-labels Public

    Synchronize Github issue and PR labels between two repositories

    DataBiosphere/sync-github-labels’s past year of commit activity
    Python 5 Apache-2.0 1 0 3 Updated Jul 6, 2024
  • terra-landing-zone-service Public
    DataBiosphere/terra-landing-zone-service’s past year of commit activity
    Java 6 BSD-3-Clause 1 0 1 Updated Jul 5, 2024
  • calhoun Public

    Notebook preview service

    DataBiosphere/calhoun’s past year of commit activity
    Jupyter Notebook 3 0 0 8 Updated Jul 5, 2024
  • tanagra Public

    Repo for the Tanagra service being developed by the All of Us DRC

    DataBiosphere/tanagra’s past year of commit activity
    Java 2 BSD-3-Clause 1 0 9 Updated Jul 5, 2024
  • toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    DataBiosphere/toil’s past year of commit activity
    Python 881 Apache-2.0 237 393 (1 issue needs help) 15 Updated Jul 5, 2024
  • terra-docker Public
    DataBiosphere/terra-docker’s past year of commit activity
    Jupyter Notebook 27 BSD-3-Clause 35 21 8 Updated Jul 5, 2024
  • terra-resource-buffer Public

    Terra Resource Buffering Service

    DataBiosphere/terra-resource-buffer’s past year of commit activity
    Java 4 BSD-3-Clause 2 0 3 Updated Jul 5, 2024
  • findable-ui Public
    DataBiosphere/findable-ui’s past year of commit activity
    TypeScript 1 Apache-2.0 0 2 0 Updated Jul 5, 2024
View all repositories

Most used topics

Loading…