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David V. Smith edited this page Dec 11, 2019
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Under construction, but this should contain lab documentation and general code to help folks get started and share knowledge.
- Running huediconv and getting your data fully into BIDS format (fieldmaps)
- Running FMRIprep
- Running MRIQC
- Coding experiments (any languages, expect E-Prime)
- Computational modeling of behavioral data
- Getting your behavioral data into BIDS format
- Running basic GLM-based analyses in FEAT (Level 1, Level 2, Level 3; activation and connectivity)
- Deleting “useless” files as you run analyses (save disk space)
- Other analyses: MVPA, tensor-ICA, dual-regression, VBM
Miscellaneous helper scripts, some of which exist (thanks to Jeff):
- Add “IntendedFor” information for json files
- Identify outlier subjects given specific parameters
- File deletion/cleanup