feat(actions): Update versions

.github/workflows/merge_master_ci.yml

@@ -23,26 +23,26 @@ jobs:
     name: Create staging image
     steps:
       - name: Check out git repository
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4.1.1
 
       - name: Extract branch name and remove illegal chars
         id: get_branch_name
         shell: bash
         run: echo "##[set-output name=branch;]$(echo "$(tr "/" "-" <<<${GITHUB_REF#refs/heads/})")"
 
       - name: Login to Docker Hub
-        uses: docker/login-action@v1
+        uses: docker/login-action@v3.0.0
         with:
           username: ${{ secrets.DOCKER_USERNAME }}
           password: ${{ secrets.DOCKER_PASSWORD }}
 
       - name: Set up Docker Buildx
         id: buildx
-        uses: docker/setup-buildx-action@v1
+        uses: docker/setup-buildx-action@v3.1.0
 
       - name: Build and push
         id: docker_build
-        uses: docker/build-push-action@v2
+        uses: docker/build-push-action@v5.1.0
         with:
           context: ./
           file: ./Dockerfile
@@ -54,12 +54,12 @@ jobs:
     name: Test and coveralls
     steps:
       - name: Set up Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5.0.0
         with:
           python-version: "3.10"
 
       - name: Check out genotype-api
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4.1.1
         with:
           repository: "Clinical-Genomics/genotype-api"
 

.github/workflows/pull_request_ci.yml

@@ -9,8 +9,8 @@ jobs:
     runs-on: ubuntu-latest
     name: Black
     steps:
-      - uses: actions/checkout@v2
-      - uses: actions/setup-python@v2
+      - uses: actions/checkout@v4.1.1
+      - uses: actions/setup-python@v5.0.0
       - uses: psf/black@stable
         with:
           black_args: ". --check --line-length 100"
@@ -20,26 +20,26 @@ jobs:
     name: Create staging docker image
     steps:
      - name: Check out git repository
-       uses: actions/checkout@v2
+       uses: actions/checkout@v4.1.1
 
      - name: Extract branch name and remove illegal chars
        id: get_branch_name
        shell: bash
        run: echo "##[set-output name=branch;]$(echo "$(tr "/" "-" <<<${GITHUB_REF#refs/heads/})")"
 
      - name: Login to Docker Hub
-       uses: docker/login-action@v1
+       uses: docker/login-action@v3.0.0
        with:
          username: ${{ secrets.DOCKER_USERNAME }}
          password: ${{ secrets.DOCKER_PASSWORD }}
 
      - name: Set up Docker Buildx
        id: buildx
-       uses: docker/setup-buildx-action@v1
+       uses: docker/setup-buildx-action@v3.1.0
 
      - name: Build and push
        id: docker_build
-       uses: docker/build-push-action@v2
+       uses: docker/build-push-action@v5.1.0
        with:
          context: ./
          file: ./Dockerfile
@@ -51,12 +51,12 @@ jobs:
     name: Test and coveralls
     steps:
       - name: Set up Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5.0.0
         with:
           python-version: "3.10"
 
       - name: Check out genotype-api
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4.1.1
         with:
           repository: "Clinical-Genomics/genotype-api"
 

.github/workflows/release_ci.yml

@@ -12,26 +12,26 @@ jobs:
     name: Push production docker image to dockerhub
     steps:
       - name: Check out git repository
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4.1.1
 
       - name: Extract branch name and remove illegal chars
         id: get_branch_name
         shell: bash
         run: echo "##[set-output name=branch;]$(echo "$(tr "/" "-" <<<${GITHUB_REF#refs/heads/})")"
 
       - name: Login to Docker Hub
-        uses: docker/login-action@v1
+        uses: docker/login-action@v3.0.0
         with:
           username: ${{ secrets.DOCKER_USERNAME }}
           password: ${{ secrets.DOCKER_PASSWORD }}
 
       - name: Set up Docker Buildx
         id: buildx
-        uses: docker/setup-buildx-action@v1
+        uses: docker/setup-buildx-action@v3.1.0
 
       - name: Build and push
         id: docker_build
-        uses: docker/build-push-action@v2
+        uses: docker/build-push-action@v5.1.0
         with:
           context: ./
           file: ./Dockerfile

requirements-dev.txt

@@ -3,4 +3,4 @@ coveralls
 pre-commit
 pylint
 pytest-cov
-pytest>=5.2
+pytest>=5.2<