fix

Clinical-Genomics · Apr 3, 2024 · 27977b4 · 27977b4
1 parent ea58682
commit 27977b4
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Showing 2 changed files with 27 additions and 17 deletions.
diff --git a/genotype_api/api/endpoints/samples.py b/genotype_api/api/endpoints/samples.py
@@ -70,6 +70,16 @@ def create_sample(
 @router.get(
     "/",
     response_model=list[SampleResponse],
+    response_model_exclude={
+        "detail": {
+            "sex": True,
+            "nocalls": True,
+            "snps": True,
+            "matches": True,
+            "mismatches": True,
+            "unknown": True,
+        },
+    },
 )
 def read_samples(
     skip: int = 0,

diff --git a/genotype_api/models.py b/genotype_api/models.py
@@ -2,28 +2,28 @@
 
 
 class SampleDetailStats(BaseModel):
-    matches: int | None
-    mismatches: int | None
-    unknown: int | None
+    matches: int | None = None
+    mismatches: int | None = None
+    unknown: int | None = None
 
 
 class SampleDetailStatus(BaseModel):
-    sex: str | None
-    snps: str | None
-    nocalls: str | None
+    sex: str | None = None
+    snps: str | None = None
+    nocalls: str | None = None
 
 
 class SampleDetail(BaseModel):
-    sex: str | None
-    snps: str | None
-    nocalls: str | None
-    matches: int | None
-    mismatches: int | None
-    unknown: int | None
-    failed_snps: list[str] | None
+    sex: str | None = None
+    snps: str | None = None
+    nocalls: str | None = None
+    matches: int | None = None
+    mismatches: int | None = None
+    unknown: int | None = None
+    failed_snps: list[str] | None = None
 
-    stats: SampleDetailStats | None
-    status: SampleDetailStatus | None
+    stats: SampleDetailStats | None = None
+    status: SampleDetailStatus | None = None
 
     @validator("stats")
     def validate_stats(cls, value, values) -> SampleDetailStats:
@@ -50,5 +50,5 @@ class MatchCounts(BaseModel):
 
 
 class MatchResult(BaseModel):
-    sample_id: str
-    match_results: MatchCounts
+    sample_id: str = None
+    match_results: MatchCounts | None = None