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name: CompatHelper | ||
on: | ||
schedule: | ||
- cron: 0 0 * * * | ||
workflow_dispatch: | ||
jobs: | ||
CompatHelper: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- name: "Install CompatHelper" | ||
run: | | ||
import Pkg | ||
name = "CompatHelper" | ||
uuid = "aa819f21-2bde-4658-8897-bab36330d9b7" | ||
version = "2" | ||
Pkg.add(; name, uuid, version) | ||
shell: julia --color=yes {0} | ||
- name: "Run CompatHelper" | ||
run: | | ||
import CompatHelper | ||
CompatHelper.main(master_branch = "master") | ||
shell: julia --color=yes {0} | ||
env: | ||
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }} | ||
# COMPATHELPER_PRIV: ${{ secrets.COMPATHELPER_PRIV }} |
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name: TagBot | ||
|
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on: | ||
issue_comment: | ||
types: | ||
- created | ||
workflow_dispatch: | ||
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jobs: | ||
TagBot: | ||
if: github.event_name == 'workflow_dispatch' || github.actor == 'JuliaTagBot' | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: JuliaRegistries/TagBot@v1 | ||
with: | ||
token: ${{ secrets.GITHUB_TOKEN }} | ||
ssh: ${{ secrets.DOCUMENTER_KEY }} |
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name: Unit Tests | ||
|
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on: | ||
- push | ||
- pull_request | ||
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jobs: | ||
test: | ||
name: Julia ${{ matrix.julia-version }} - ${{ matrix.os }} - ${{ matrix.julia-arch }} - ${{ github.event_name }} | ||
runs-on: ${{ matrix.os }} | ||
continue-on-error: ${{ matrix.experimental }} | ||
strategy: | ||
fail-fast: false | ||
matrix: | ||
julia-version: | ||
- '1.0' # LTS | ||
- '1' | ||
julia-arch: [x64, x86] | ||
os: [ubuntu-latest, windows-latest, macOS-latest] | ||
exclude: | ||
- os: macOS-latest | ||
julia-arch: x86 | ||
experimental: [false] | ||
include: | ||
- julia-version: nightly | ||
julia-arch: x64 | ||
os: ubuntu-latest | ||
experimental: true | ||
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steps: | ||
- name: Checkout Repository | ||
uses: actions/checkout@v2 | ||
- name: Setup Julia | ||
uses: julia-actions/setup-julia@v1 | ||
with: | ||
version: ${{ matrix.julia-version }} | ||
- name: Run Tests | ||
uses: julia-actions/julia-runtest@v1 | ||
- name: Create CodeCov | ||
uses: julia-actions/julia-processcoverage@v1 | ||
- name: Upload CodeCov | ||
uses: codecov/codecov-action@v1 | ||
with: | ||
file: ${{ steps.coverage-processing.outputs.lcov-file }} | ||
fail_ci_if_error: false |
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# Files generated by invoking Julia with --code-coverage | ||
*.jl.cov | ||
*.jl.*.cov | ||
*.jl.mem | ||
### JetBrains template | ||
# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio and WebStorm | ||
# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839 | ||
|
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/.idea | ||
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# User-specific stuff | ||
.idea/**/workspace.xml | ||
.idea/**/tasks.xml | ||
.idea/**/dictionaries | ||
.idea/**/shelf | ||
|
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# Sensitive or high-churn files | ||
.idea/**/dataSources/ | ||
.idea/**/dataSources.ids | ||
.idea/**/dataSources.local.xml | ||
.idea/**/sqlDataSources.xml | ||
.idea/**/dynamic.xml | ||
.idea/**/uiDesigner.xml | ||
|
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# Gradle | ||
.idea/**/gradle.xml | ||
.idea/**/libraries | ||
|
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# CMake | ||
cmake-build-debug/ | ||
cmake-build-release/ | ||
|
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# Mongo Explorer plugin | ||
.idea/**/mongoSettings.xml | ||
|
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# File-based project format | ||
*.iws | ||
|
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# IntelliJ | ||
out/ | ||
|
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# mpeltonen/sbt-idea plugin | ||
.idea_modules/ | ||
|
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# JIRA plugin | ||
atlassian-ide-plugin.xml | ||
|
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# Cursive Clojure plugin | ||
.idea/replstate.xml | ||
|
||
# Crashlytics plugin (for Android Studio and IntelliJ) | ||
com_crashlytics_export_strings.xml | ||
crashlytics.properties | ||
crashlytics-build.properties | ||
fabric.properties | ||
|
||
# Editor-based Rest Client | ||
.idea/httpRequests | ||
### Linux template | ||
*~ | ||
|
||
# temporary files which can be created if a process still has a handle open of a deleted file | ||
.fuse_hidden* | ||
|
||
# KDE directory preferences | ||
.directory | ||
|
||
# Linux trash folder which might appear on any partition or disk | ||
.Trash-* | ||
|
||
# .nfs files are created when an open file is removed but is still being accessed | ||
.nfs* | ||
### Eclipse template | ||
|
||
.metadata | ||
bin/ | ||
tmp/ | ||
*.tmp | ||
*.bak | ||
*.swp | ||
*~.nib | ||
local.properties | ||
.settings/ | ||
.loadpath | ||
.recommenders | ||
|
||
# External tool builders | ||
.externalToolBuilders/ | ||
|
||
# Locally stored "Eclipse launch configurations" | ||
*.launch | ||
|
||
# PyDev specific (Python IDE for Eclipse) | ||
*.pydevproject | ||
|
||
# CDT-specific (C/C++ Development Tooling) | ||
.cproject | ||
|
||
# CDT- autotools | ||
.autotools | ||
|
||
# Java annotation processor (APT) | ||
.factorypath | ||
|
||
# PDT-specific (PHP Development Tools) | ||
.buildpath | ||
|
||
# sbteclipse plugin | ||
.target | ||
|
||
# Tern plugin | ||
.tern-project | ||
|
||
# TeXlipse plugin | ||
.texlipse | ||
|
||
# STS (Spring Tool Suite) | ||
.springBeans | ||
|
||
# Code Recommenders | ||
.recommenders/ | ||
|
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# Scala IDE specific (Scala & Java development for Eclipse) | ||
.cache-main | ||
.scala_dependencies | ||
.worksheet | ||
### Vim template | ||
# Swap | ||
[._]*.s[a-v][a-z] | ||
[._]*.sw[a-p] | ||
[._]s[a-v][a-z] | ||
[._]sw[a-p] | ||
|
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# Session | ||
Session.vim | ||
|
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# Temporary | ||
.netrwhist | ||
# Auto-generated tag files | ||
tags | ||
### macOS template | ||
# General | ||
.DS_Store | ||
.AppleDouble | ||
.LSOverride | ||
|
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# Icon must end with two \r | ||
Icon | ||
|
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# Thumbnails | ||
._* | ||
|
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# Files that might appear in the root of a volume | ||
.DocumentRevisions-V100 | ||
.fseventsd | ||
.Spotlight-V100 | ||
.TemporaryItems | ||
.Trashes | ||
.VolumeIcon.icns | ||
.com.apple.timemachine.donotpresent | ||
|
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# Directories potentially created on remote AFP share | ||
.AppleDB | ||
.AppleDesktop | ||
Network Trash Folder | ||
Temporary Items | ||
.apdisk | ||
### Windows template | ||
# Windows thumbnail cache files | ||
Thumbs.db | ||
ehthumbs.db | ||
ehthumbs_vista.db | ||
|
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# Dump file | ||
*.stackdump | ||
|
||
# Folder config file | ||
[Dd]esktop.ini | ||
|
||
# Recycle Bin used on file shares | ||
$RECYCLE.BIN/ | ||
|
||
# Windows Installer files | ||
*.cab | ||
*.msi | ||
*.msix | ||
*.msm | ||
*.msp | ||
# Files generated by invoking Julia with --track-allocation | ||
*.jl.mem | ||
|
||
# Windows shortcuts | ||
*.lnk | ||
# System-specific files and directories generated by the BinaryProvider and BinDeps packages | ||
# They contain absolute paths specific to the host computer, and so should not be committed | ||
deps/deps.jl | ||
deps/build.log | ||
deps/downloads/ | ||
deps/usr/ | ||
deps/src/ | ||
|
||
# Build artifacts for creating documentation generated by the Documenter package | ||
docs/build/ | ||
docs/site/ | ||
|
||
# File generated by Pkg, the package manager, based on a corresponding Project.toml | ||
# It records a fixed state of all packages used by the project. As such, it should not be | ||
# committed for packages, but should be committed for applications that require a static | ||
# environment. | ||
Manifest.toml |
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name = "Bedgraph" | ||
uuid = "0bcc2ff6-69eb-520d-bede-0374fc5bd2fd" | ||
authors = ["Ciarán O'Mara <[email protected]>"] | ||
version = "2.1.0" | ||
version = "2.2.0" | ||
|
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[compat] | ||
julia = "0.7, 1" | ||
|
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d09be57
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@JuliaRegistrator register()
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Registration pull request updated: JuliaRegistries/General/39859
After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.
This will be done automatically if the Julia TagBot GitHub Action is installed, or can be done manually through the github interface, or via: