Merge pull request #67 from Chaste/66-minimum-supported-versions

Updated minimum supported versions
Chaste · Feb 26, 2024 · f0c53f0 · f0c53f0
2 parents 1cfa6d8 + 86dbadd
commit f0c53f0
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Showing 8 changed files with 41 additions and 93 deletions.
diff --git a/scripts/install_boost.sh b/scripts/install_boost.sh
@@ -78,9 +78,9 @@ major=${version_arr[0]}
 minor=${version_arr[1]}
 ver_si_on=${version//\./_}  # Converts 1.69.0 to 1_69_0
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -lt 1) || ((${major} -eq 1) && (${minor} -lt 62)) ]]; then  # Boost < 1.62.x
-    echo "$(basename $0): Boost versions < 1.62 not supported"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 1) || ((${major} -eq 1) && (${minor} -lt 67)) ]]; then  # Boost < 1.67.x
+    echo "$(basename $0): Boost versions < 1.67 not supported"
     exit 1
 fi
 

diff --git a/scripts/install_cmake.sh b/scripts/install_cmake.sh
@@ -37,10 +37,13 @@ parallel="${parallel:-$(nproc)}"
 version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
+patch=${version_arr[2]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -lt 3) || ((${major} -eq 3) && (${minor} -lt 5)) ]]; then  # CMake < 3.5.x
-    echo "$(basename $0): CMake versions < 3.5 not supported"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 3) 
+  || ((${major} -eq 3) && (${minor} -lt 16)) 
+  || ((${major} -eq 3) && (${minor} -eq 16) && (${patch} -lt 3)) ]]; then  # CMake < 3.16.3
+    echo "$(basename $0): CMake versions < 3.16.3 not supported"
     exit 1
 fi
 

diff --git a/scripts/install_petsc_hdf5.sh b/scripts/install_petsc_hdf5.sh
@@ -105,28 +105,25 @@ petsc_minor=${petsc_version_arr[1]}
 hdf5_version_arr=(${hdf5_version//\./ })
 hdf5_major=${hdf5_version_arr[0]}
 hdf5_minor=${hdf5_version_arr[1]}
+hdf5_patch=${hdf5_version_arr[2]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${petsc_major} -lt 3) || ((${petsc_major} -eq 3) && (${petsc_minor} -lt 7)) ]]; then  # PETSc < 3.7.x
-    echo "$(basename $0): PETSc versions < 3.7 not supported"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${petsc_major} -lt 3) 
+  || ((${petsc_major} -eq 3) && (${petsc_minor} -lt 12)) ]]; then  # PETSc < 3.12.x
+    echo "$(basename $0): PETSc versions < 3.12 not supported"
     exit 1
 fi
 
-if [[ (${hdf5_major} -lt 1) || ((${hdf5_major} -eq 1) && (${hdf5_minor} -lt 10)) ]]; then  # HDF5 < 1.10.x
-    echo "$(basename $0): HDF5 versions < 1.10 not supported"
+if [[ (${hdf5_major} -lt 1) 
+  || ((${hdf5_major} -eq 1) && (${hdf5_minor} -lt 10))
+  || ((${hdf5_major} -eq 1) && (${hdf5_minor} -eq 10) && (${hdf5_patch} -lt 4)) ]]; then  # HDF5 < 1.10.4
+    echo "$(basename $0): HDF5 versions < 1.10.4 not supported"
     exit 1
 fi
 
 # Preferred MPICH versions
-URL_MPICH_3_3=https://www.mpich.org/static/downloads/3.3/mpich-3.3.tar.gz
 URL_MPICH_3_4=https://www.mpich.org/static/downloads/3.4a3/mpich-3.4a3.tar.gz
 
-# Fixes for broken Hypre links in some PETSc versions
-URL_HYPRE_2_11=https://github.com/hypre-space/hypre/archive/refs/tags/v2.11.1.tar.gz
-URL_HYPRE_2_12=https://github.com/hypre-space/hypre/archive/refs/tags/v2.12.0.tar.gz
-URL_HYPRE_2_14=https://github.com/hypre-space/hypre/archive/refs/tags/v2.14.0.tar.gz
-URL_HYPRE_2_15=https://github.com/hypre-space/hypre/archive/refs/tags/v2.15.1.tar.gz
-
 # Retrieving packages to fix "url is not a tarball" errors
 mkdir -p ${base_dir}/src/petsc_hdf5
 cd ${base_dir}/src/petsc_hdf5
@@ -143,53 +140,7 @@ if [ -n "${mpich_version}" ]; then
     download_mpich=$(pwd)/$(basename ${URL_MPICH})
 fi
 
-download_hypre=1
-if [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 7) ]]; then  # PETSc 3.7.x
-    if [ -z "${mpich_version}" ]; then
-        wget -nc ${URL_MPICH_3_3}
-        download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
-    fi
-
-    wget -nc ${URL_HYPRE_2_11}  # Fixes broken hypre link in this version
-    download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_11})
-
-elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 8) ]]; then  # PETSc 3.8.x
-    if [ -z "${mpich_version}" ]; then
-        wget -nc ${URL_MPICH_3_3}
-        download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
-    fi
-
-    wget -nc ${URL_HYPRE_2_12}  # Fixes broken hypre link in this version
-    download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_12})
-
-elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 9) ]]; then  # PETSc 3.9.x
-    if [ -z "${mpich_version}" ]; then
-        wget -nc ${URL_MPICH_3_3}
-        download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
-    fi
-
-    wget -nc ${URL_HYPRE_2_14}  # Fixes broken hypre link in this version
-    download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_14})
-
-elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 10) ]]; then  # PETSc 3.10.x
-    if [ -z "${mpich_version}" ]; then
-        wget -nc ${URL_MPICH_3_3}
-        download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
-    fi
-
-    wget -nc ${URL_HYPRE_2_14}  # Fixes broken hypre link in this version
-    download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_14})
-
-elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 11) ]]; then  # PETSc 3.11.x
-    if [ -z "${mpich_version}" ]; then
-        wget -nc ${URL_MPICH_3_3}
-        download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
-    fi
-
-    wget -nc ${URL_HYPRE_2_15}  # Fixes broken hypre link in this version
-    download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_15})
-
-elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 12) ]]; then  # PETSc 3.12.x
+if [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 12) ]]; then  # PETSc 3.12.x
     if [ -z "${mpich_version}" ]; then
         wget -nc ${URL_MPICH_3_4}
         download_mpich=$(pwd)/$(basename ${URL_MPICH_3_4})
@@ -212,12 +163,6 @@ if [[ (${petsc_major} -eq 3) && ((${petsc_minor} -eq 12) || (${petsc_minor} -eq
     sed -i.bak 's/thread.isAlive()/thread.is_alive()/g' config/BuildSystem/script.py
 fi
 
-# Set Python version
-PYTHON=python3
-if [[ (${petsc_major} -lt 3) || ((${petsc_major} -eq 3) && (${petsc_minor} -lt 11)) ]]; then  # PETSc < 3.11.x
-    PYTHON=python2
-fi
-
 # Build and install
 cd ${install_dir}
 export PETSC_DIR=$(pwd)
@@ -226,7 +171,7 @@ case ${petsc_arch} in
 
     linux-gnu)
         export PETSC_ARCH=linux-gnu
-        ${PYTHON} ./configure \
+        python3 ./configure \
             --with-make-np=${parallel} \
             --with-cc=gcc \
             --with-cxx=g++ \
@@ -240,14 +185,14 @@ case ${petsc_arch} in
             --download-hdf5=${download_hdf5} \
             --download-parmetis=1 \
             --download-metis=1 \
-            --download-hypre=${download_hypre} \
+            --download-hypre=1 \
             --with-shared-libraries && \
         make -j ${parallel} all
         ;;
 
     linux-gnu-opt)
         export PETSC_ARCH=linux-gnu-opt
-        ${PYTHON} ./configure \
+        python3 ./configure \
             --with-make-np=${parallel} \
             --with-cc=gcc \
             --with-cxx=g++ \
@@ -259,7 +204,7 @@ case ${petsc_arch} in
             --download-hdf5=${download_hdf5} \
             --download-parmetis=1 \
             --download-metis=1 \
-            --download-hypre=${download_hypre} \
+            --download-hypre=1 \
             --with-shared-libraries \
             --with-debugging=0 && \
         make -j ${parallel} all

diff --git a/scripts/install_python.sh b/scripts/install_python.sh
@@ -38,15 +38,10 @@ version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -eq 3) && (${minor} -lt 6) ]]; then  # Python3 < 3.6.x
-    echo "$(basename $0): Python3 versions < 3.6 not supported"
-    exit 1
-fi
-
-# PETSc versions < 3.11.x need Python2 to configure builds
-if [[ (${major} -eq 2) && (${minor} -lt 7) ]]; then  # Python2 < 2.7.x
-    echo "$(basename $0): Python2 versions < 2.7 not supported (for building dependencies)"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 3) 
+  || ((${major} -eq 3) && (${minor} -lt 8)) ]]; then  # Python < 3.8.x
+    echo "$(basename $0): Python3 versions < 3.8 not supported"
     exit 1
 fi
 

diff --git a/scripts/install_sundials.sh b/scripts/install_sundials.sh
@@ -72,9 +72,10 @@ version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -lt 2) || ((${major} -eq 2) && (${minor} -lt 7)) ]]; then  # Sundials < 2.7.x
-    echo "$(basename $0): Sundials versions < 2.7 not supported"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 3) 
+  || ((${major} -eq 3) && (${minor} -lt 1)) ]]; then  # Sundials < 3.1.x
+    echo "$(basename $0): Sundials versions < 3.1 not supported"
     exit 1
 fi
 

diff --git a/scripts/install_vtk.sh b/scripts/install_vtk.sh
@@ -84,8 +84,9 @@ version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -lt 6) || ((${major} -eq 6) && (${minor} -lt 3)) ]]; then  # VTK < 6.3.x
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 6) 
+  || ((${major} -eq 6) && (${minor} -lt 3)) ]]; then  # VTK < 6.3.x
     echo "$(basename $0): VTK versions < 6.3 not supported"
     exit 1
 fi

diff --git a/scripts/install_xercesc.sh b/scripts/install_xercesc.sh
@@ -72,10 +72,13 @@ ver_si_on=${version//\./_}  # Converts 3.1.1 to 3_1_1
 version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
+patch=${version_arr[2]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
-if [[ (${major} -lt 3) || ((${major} -eq 3) && (${minor} -lt 2)) ]]; then  # Xerces-C < 3.2.x
-    echo "$(basename $0): Xerces-C versions < 3.2 not supported"
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
+if [[ (${major} -lt 3) 
+  || ((${major} -eq 3) && (${minor} -lt 2))
+  || ((${major} -eq 3) && (${minor} -eq 2) && (${patch} -lt 1)) ]]; then  # Xerces-C < 3.2.1
+    echo "$(basename $0): Xerces-C versions < 3.2.1 not supported"
     exit 1
 fi
 

diff --git a/scripts/install_xsd.sh b/scripts/install_xsd.sh
@@ -66,7 +66,7 @@ version_arr=(${version//\./ })
 major=${version_arr[0]}
 minor=${version_arr[1]}
 
-# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
+# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
 if [ ${major} -lt 4 ]; then  # XSD < 4.0.x
     echo "$(basename $0): XSD versions < 4.0 not supported"
     exit 1