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License update
Project license changed to GPL3.0.
Python API
Added automatic saving to HDF5 files (HDF5Handler) and XDMF files (XDMFHandler). Data saved
with XDMFHandler can be visualized with scientific visualization software like Paraview.
Internal code base
Performance improvement: Identify the tetrahedra with molecule changes via diffusion
(changes caused by reaction are updated by the ssa operator) and update the associated propensities.