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Linting and Fixing All Tools #101

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Merged
martenson merged 3 commits into from
Dec 5, 2025
Merged

Linting and Fixing All Tools #101

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15f0181
output of make lint & make fix on all instances
martenson Dec 5, 2025
7bc8741
clarify transcriptomics seciton label
martenson Dec 5, 2025
7e27159
one more touch
martenson Dec 5, 2025
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4 changes: 2 additions & 2 deletions usegalaxy.cz/fasta_fastq.yml.lock
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Original file line number Diff line number Diff line change
Expand Up @@ -672,5 +672,5 @@ tools:
owner: bgruening
revisions:
- 76ea9d4604bc
tool_panel_section_id: uncategorized
tool_panel_section_label: Uncategorized
tool_panel_section_id: fasta_fastq
tool_panel_section_label: FASTA/FASTQ
16 changes: 8 additions & 8 deletions usegalaxy.cz/imaging.yml.lock
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Original file line number Diff line number Diff line change
Expand Up @@ -756,24 +756,24 @@ tools:
revisions:
- 49c178651194
- b1ead1b7e0aa
tool_panel_section_id: uncategorized
tool_panel_section_label: Uncategorized
tool_panel_section_id: imaging
tool_panel_section_label: Imaging
- name: scimap_phenotyping
owner: goeckslab
revisions:
- 37dc4f51e827
- 88fca6e905be
tool_panel_section_id: uncategorized
tool_panel_section_label: Uncategorized
tool_panel_section_id: imaging
tool_panel_section_label: Imaging
- name: backsub
owner: goeckslab
revisions:
- bf9f98a7f936
tool_panel_section_id: uncategorized
tool_panel_section_label: Uncategorized
tool_panel_section_id: imaging
tool_panel_section_label: Imaging
- name: scimap_plotting
owner: goeckslab
revisions:
- 05a8d9dea3df
tool_panel_section_id: uncategorized
tool_panel_section_label: Uncategorized
tool_panel_section_id: imaging
tool_panel_section_label: Imaging
2 changes: 1 addition & 1 deletion usegalaxy.cz/transcriptomics.yml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
tool_panel_section_label: CellTypeScan
tool_panel_section_label: Transcriptomics
tools:
- name: decoupler_pseudobulk
owner: ebi-gxa
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6 changes: 3 additions & 3 deletions usegalaxy.cz/transcriptomics.yml.lock
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
install_repository_dependencies: false
install_resolver_dependencies: false
install_tool_dependencies: false
tool_panel_section_label: CellTypeScan
tool_panel_section_label: Transcriptomics
tools:
- name: decoupler_pseudobulk
owner: ebi-gxa
Expand All @@ -15,5 +15,5 @@ tools:
revisions:
- 7ef2403a250d
- a4774b7b2e85
tool_panel_section_id: hca_scanpy
tool_panel_section_label: HCA-Scanpy
tool_panel_section_id: transcriptomics
tool_panel_section_label: Transcriptomics