Remove py37, add py311, and fix Rectangle kwarg error (#1082)

---------

Co-authored-by: Adrien Berchet <[email protected]>

.github/workflows/run-tox.yml

@@ -12,12 +12,12 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ['3.7', '3.8', '3.9', '3.10']
+        python-version: ['3.8', '3.9', '3.10', '3.11']
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies

doc/source/developer.rst

@@ -59,9 +59,9 @@ individually:
 
 .. code-block:: bash
 
-        $ tox -e py36-lint       # runs only pylint
-        $ tox -e py36-docs       # run only documentation check
-        $ tox -e py36            # run only the tests
+        $ tox -e py38-lint       # runs only pylint
+        $ tox -e py38-docs       # run only documentation check
+        $ tox -e py38            # run only the tests
 
 You can also run tests manually via `pylint` but you need to make sure that you have installed
 all required dependencies in your virtual environment:
@@ -81,4 +81,4 @@ Then, run the tests manually. For example,
 Python compatibility
 --------------------
 
-We test the code against Python 3.6 and 3.7.
+We test the code against Python 3.8, 3.9, 3.10, and 3.11.

neurom/view/matplotlib_impl.py

@@ -146,7 +146,7 @@ def _get_rectangle(x, y, linewidth):
             return Rectangle(x - linewidth / 2. * np.array([-np.sin(angle), np.cos(angle)]),
                              np.linalg.norm(diff),
                              linewidth,
-                             np.rad2deg(angle))
+                             angle=np.rad2deg(angle))
 
         segs = [_get_rectangle((seg[0][plane0], seg[0][plane1]),
                                (seg[1][plane0], seg[1][plane1]),

setup.py

@@ -60,16 +60,16 @@
         ],
     },
     include_package_data=True,
-    python_requires='>=3.7',
+    python_requires='>=3.8',
     classifiers=[
         'Development Status :: 6 - Mature',
         'Intended Audience :: Education',
         'Intended Audience :: Science/Research',
         'Programming Language :: Python',
-        'Programming Language :: Python :: 3.7',
         'Programming Language :: Python :: 3.8',
         'Programming Language :: Python :: 3.9',
         'Programming Language :: Python :: 3.10',
+        'Programming Language :: Python :: 3.11',
         'Topic :: Scientific/Engineering :: Bio-Informatics',
     ],
     use_scm_version={"local_scheme": "no-local-version"},

tox.ini

@@ -6,7 +6,7 @@ testdeps =
 
 [tox]
 envlist =
-    py{37,38,39,310}
+    py{38,39,310,311}
     py38-lint
     py38-coverage
     py38-docs
@@ -58,7 +58,7 @@ convention = google
 
 [gh-actions]
 python =
-  3.7: py37
   3.8: py38
   3.9: py39
   3.10: py310
+  3.11: py311