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prepare release 0.1.4
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afoncubierta committed Apr 20, 2021
2 parents 847c6aa + c23c0ae commit a034c13
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21 changes: 8 additions & 13 deletions .travis.yml
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@@ -1,3 +1,5 @@
vm:
size: 2x-large
language: python
python:
- 3.7
Expand All @@ -13,32 +15,25 @@ before_install:
- source activate histocartography
- python --version
- pip install -U pip==20.2.4
# for the documentation
- pip install sphinx autodoc sphinx_autodoc_typehints sphinx_rtd_theme myst_parser better_apidoc

install:
# install rdkit
- conda env update -q --file environment.yml
# install style dependencies
- pip install black pep8
# install the module
- pip install codecov
- pip install -e .
script:
# style checking
# - python -m black histocartography --check --diff --color
# - python -m pep8 --ignore=E501 histocartography
# static type checking
# - python -m mypy histocartography
# tests
- python -m unittest discover -s test -p "test_*" -v
# build the docs
- coverage run -m unittest discover -s test -p "test_*" -v
# build the docs
# cd docs && make html && cd ..
- cd docs && make html && cd ..
after_success:
- bash <(curl -s https://codecov.io/bash)
deploy:
- provider: pages
skip_cleanup: true
github_token: $GITHUB_TOKEN # Set in the settings page of your repository, as a secure variable
local_dir: docs/_build/html
github_url: github.ibm.com
github_url: $GITHUB_URL
on:
branch: main
2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -88,7 +88,7 @@ The output can be then visualized with:
```

<p align="center">
<img src="https://ibm.box.com/shared/static/77ok9kjy1nzu0bzg3fatfzflz5e4yqyk.png" height="400">
<img src="https://raw.githubusercontent.com/histocartography/histocartography/main/docs/_static/1238_adh_10.png" height="400">
</p>

A list of examples to discover the capabilities of the `histocartography` library is provided in `examples`. The examples will show you how to perform:
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4 changes: 2 additions & 2 deletions setup.py
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Expand Up @@ -128,12 +128,12 @@ def run(self):
# TODO: Update these values according to the name of the module.
setup(
name='histocartography',
version='0.1.3',
version='0.1.4',
description='Installable histocartography package.',
long_description=open('README.md').read(),
long_description_content_type='text/markdown',
url='https://github.com/histocartography/histocartography',
download_url='https://github.com/histocartography/histocartography/archive/refs/tags/v0.1.3.tar.gz',
download_url='https://github.com/histocartography/histocartography/archive/refs/tags/v0.1.4.tar.gz',
author='Guillaume Jaume, Pushpak Pati, Antonio Foncubierta Rodríguez',
author_email='[email protected], [email protected], [email protected]',
packages=find_packages('.'),
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