Add new example notebook and repository links #234
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: MacOS tests | |
| on: | |
| push: | |
| branches: [ "pygmtsar2" ] | |
| pull_request: | |
| branches: [ "pygmtsar2" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| Pico_do_Fogo_2014: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [macos-12] | |
| python-version: ["3.11"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install system dependencies | |
| run: | | |
| uname -a | |
| # prepare system | |
| brew install wget libtiff hdf5 gmt ghostscript autoconf | |
| - name: Compile GMTSAR | |
| run: | | |
| git config --global advice.detachedHead false | |
| git clone --branch master https://github.com/gmtsar/gmtsar GMTSAR | |
| cd GMTSAR | |
| git checkout e98ebc0f4164939a4780b1534bac186924d7c998 | |
| autoconf | |
| ./configure --with-orbits-dir=/tmp | |
| make | |
| make install | |
| # check installation | |
| export PATH=$PATH:/Users/runner/work/gmtsar/gmtsar/GMTSAR/bin | |
| echo "Start gmtsar_sharedir.csh" | |
| gmtsar_sharedir.csh | |
| - name: Install PyGMTSAR | |
| run: | | |
| pip3 install pyvista panel | |
| pip3 install -e ./pygmtsar/ | |
| - name: Run test | |
| working-directory: tests | |
| run: | | |
| export PATH=$PATH:/Users/runner/work/gmtsar/gmtsar/GMTSAR/bin | |
| ulimit -n 10000 | |
| # remove Google Colab specific commands and add __main__ section | |
| cat pico_do_fogo_volcano_eruption_2014.py \ | |
| | sed '/if \x27google\.colab\x27 in sys\.modules:/,/^$/d' \ | |
| | sed 's/^[[:blank:]]*!.*$//' \ | |
| | awk '/username = \x27GoogleColab2023\x27/ {print "if __name__ == \x27__main__\x27:"; indent=1} {if(indent) sub(/^/, " "); print}' \ | |
| > pico_do_fogo_volcano_eruption_2014.fixed.py | |
| python3 pico_do_fogo_volcano_eruption_2014.fixed.py | |
| - name: Archive test results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Plots (${{ matrix.os }}, ${{ matrix.python-version }}) | |
| path: tests/*.jpg | |
| if-no-files-found: error |