[pre-commit.ci] pre-commit autoupdate (#69) #228
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name: sharrow testing | |
on: | |
push: | |
branches: [ main, develop ] | |
tags: | |
- 'v[0-9]+.[0-9]+**' | |
pull_request: | |
branches: [ main, develop ] | |
tags: | |
- 'v[0-9]+.[0-9]+**' | |
workflow_dispatch: | |
jobs: | |
fmt: | |
name: formatting quality | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
- name: Install Ruff | |
run: | | |
python -m pip install ruff | |
- name: Lint with Ruff | |
run: | | |
# code quality check, stop the build for any errors | |
ruff check . --show-fixes --exit-non-zero-on-fix | |
test-minimal: | |
needs: fmt | |
name: minimal tests | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
- name: Install pytest | |
run: | | |
python -m pip install pytest pytest-cov pytest-regressions pytest-xdist nbmake | |
- name: Install sharrow | |
run: | | |
python -m pip install . | |
- name: Initial simple tests | |
# tests that sharrow can be imported and that categorical tests can be run | |
run: | | |
python -m pytest sharrow/tests/test_categorical.py | |
- name: Install openmatrix | |
run: | | |
python -m pip install openmatrix | |
- name: Dataset tests | |
# tests that the datasets can be read and that the tests can be run | |
run: | | |
python -m pytest sharrow/tests/test_datasets.py | |
- name: Install zarr and dask-diagnostics | |
run: | | |
python -m pip install zarr "dask[diagnostics]" | |
- name: More complete test with pytest | |
run: | | |
python -m pytest -v --disable-warnings sharrow/tests | |
test: | |
needs: fmt | |
name: ${{ matrix.os }} py${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
python-version: ["3.10", "3.11", "3.12"] | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install Python and Dependencies | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
miniforge-version: latest | |
environment-file: envs/testing.yml | |
python-version: ${{ matrix.python-version }} | |
activate-environment: testing-env | |
auto-activate-base: false | |
auto-update-conda: false | |
- name: Install sharrow | |
run: | | |
python -m pip install . | |
- name: Conda checkup | |
run: | | |
conda info -a | |
conda list | |
- name: Lint with Ruff | |
run: | | |
# code quality check | |
# stop the build if there are Python syntax errors or undefined names | |
ruff check . --select=E9,F63,F7,F82 --no-fix | |
# stop the build for any other configured Ruff linting errors | |
ruff check . --show-fixes --exit-non-zero-on-fix | |
- name: Test with pytest | |
run: | | |
python -m pytest | |
deploy-docs: | |
needs: test | |
# only on pushes tagged with v... | |
if: startsWith(github.ref, 'refs/tags/v') | |
runs-on: ubuntu-latest | |
environment: asim | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.10 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Install dependencies | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
miniforge-version: latest | |
environment-file: envs/testing.yml | |
python-version: "3.10" | |
activate-environment: testing-env | |
auto-activate-base: false | |
auto-update-conda: false | |
- name: Install Jupyterbook and ruamel.yaml | |
run: | | |
conda install jupyter-book ruamel.yaml sphinx-autosummary-accessors -c conda-forge | |
- name: Install sharrow | |
run: | | |
python -m pip install --no-deps . | |
- name: Conda checkup | |
run: | | |
conda info -a | |
conda list | |
- name: Install pip build | |
run: | | |
python -m pip install --upgrade build | |
- name: Build wheel | |
run: | | |
python -m build | |
- name: Build the docs | |
run: | | |
python docs/_script/run_all.py | |
jupyter-book build ./docs | |
- name: Push to GitHub Pages | |
uses: peaceiris/[email protected] | |
with: | |
github_token: ${{ secrets.GITHUB_TOKEN }} | |
# Token is created automatically by Github Actions, no other config needed | |
publish_dir: ./docs/_build/html | |
# now send to PyPI | |
- name: Publish to PyPI | |
uses: pypa/gh-action-pypi-publish@release/v1 | |
if: github.repository_owner == 'ActivitySim' | |
with: | |
user: __token__ | |
password: ${{ secrets.PYPI_API_TOKEN }} | |
activitysim-examples: | |
# test that updates to sharrow will not break the activitysim canonical examples | |
needs: fmt | |
env: | |
python-version: "3.10" | |
label: linux-64 | |
strategy: | |
matrix: | |
include: | |
- region: ActivitySim 1-Zone Example (MTC) | |
region-org: ActivitySim | |
region-repo: activitysim-prototype-mtc | |
region-branch: extended | |
- region: ActivitySim 2-Zone Example (SANDAG) | |
region-org: ActivitySim | |
region-repo: sandag-abm3-example | |
region-branch: main | |
fail-fast: false | |
defaults: | |
run: | |
shell: bash -l {0} | |
name: ${{ matrix.region }} | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Sharrow | |
uses: actions/checkout@v4 | |
with: | |
path: 'sharrow' | |
- name: Checkout ActivitySim | |
uses: actions/checkout@v4 | |
with: | |
repository: 'ActivitySim/activitysim' | |
ref: 'main' | |
path: 'activitysim' | |
- name: Setup Miniforge | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
miniforge-version: latest | |
activate-environment: asim-test | |
python-version: ${{ env.python-version }} | |
- name: Set cache date for year and month | |
run: echo "DATE=$(date +'%Y%m')" >> $GITHUB_ENV | |
- uses: actions/cache@v4 | |
with: | |
path: | | |
${{ env.CONDA }}/envs | |
~/.cache/ActivitySim | |
key: ${{ env.label }}-conda-${{ hashFiles('activitysim/conda-environments/github-actions-tests.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
id: cache | |
- name: Update environment | |
run: | | |
conda env update -n asim-test -f activitysim/conda-environments/github-actions-tests.yml | |
if: steps.cache.outputs.cache-hit != 'true' | |
- name: Install sharrow | |
# installing from source | |
run: | | |
python -m pip install ./sharrow | |
- name: Install activitysim | |
# installing without dependencies is faster, we trust that all needed dependencies | |
# are in the conda environment defined above. Also, this avoids pip getting | |
# confused and reinstalling tables (pytables). | |
run: | | |
python -m pip install ./activitysim --no-deps | |
- name: Conda checkup | |
run: | | |
conda info -a | |
conda list | |
- name: Checkout Example | |
uses: actions/checkout@v4 | |
with: | |
repository: '${{ matrix.region-org }}/${{ matrix.region-repo }}' | |
ref: '${{ matrix.region-branch }}' | |
path: '${{ matrix.region-repo }}' | |
- name: Test ${{ matrix.region }} | |
run: | | |
cd ${{ matrix.region-repo }}/test | |
python -m pytest . |