test_filters assert 'Extracting image from tests/resources/test_image/minicircle_small.topostats' in "INFO topostats:validation.py:32 The YAML configuration file is valid.\nINFO topostats:validation.py:32 The YAML plotting configuration file is valid.\nINFO topostats:processing.py:1386 Configuration run options are consistent, processing can proceed.\nINFO topostats:run_modules.py:140 Configuration file loaded from : D:\\a\\TopoStats\\TopoStats\\topostats\\default_config.yaml\nINFO topostats:run_modules.py:141 Scanning for images in : tests\\resources\\test_image\nINFO topostats:run_modules.py:142 Output directory : output\nINFO topostats:run_modules.py:143 Looking for images with extension : .topostats\nINFO topostats:run_modules.py:144 Images with extension .topostats in tests\\resources\\test_image : 1\nINFO topostats:run_modules.py:149 Thresholding method (Filtering) : std_dev\nINFO topostats:run_modules.py:150 Thresholding method (Grains) : std_dev\nINFO topostats:io.py:774 Extracting image from tests\\resources\\test_image\\minicircle_small.topostats\nINFO topostats:run_modules.py:437 [minicircle_small] Filtering completed.\nINFO topostats:processing.py:1459 \n\n~~~~~~~~~~...s Found : 1\n Successfully Processed^1 : 1 (100.0%)\n All statistics : output/all_statistics.csv\n Distribution Plots : Disabled. Enable in config 'summary_stats/run' if needed.\n\n Configuration : output/config.yaml\n\n Email : [email protected]\n Documentation : https://afm-spm.github.io/topostats/\n Source Code : https://github.com/AFM-SPM/TopoStats/\n Bug Reports/Feature Request : https://github.com/AFM-SPM/TopoStats/issues/new/choose\n Citation File Format : https://github.com/AFM-SPM/TopoStats/blob/main/CITATION.cff\n\n ^1 Successful processing of an image is detection of grains and calculation of at least\n grain statistics. If these have been disabled the percentage will be 0.\n\n If you encounter bugs/issues or have feature requests please report them at the above URL\n or email us.\n\n If you have found TopoStats useful please consider citing it. A Citation File Format is\n linked above and available from the Source Code page.\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n\n" + where "INFO topostats:validation.py:32 The YAML configuration file is valid.\nINFO topostats:validation.py:32 The YAML plotting configuration file is valid.\nINFO topostats:processing.py:1386 Configuration run options are consistent, processing can proceed.\nINFO topostats:run_modules.py:140 Configuration file loaded from : D:\\a\\TopoStats\\TopoStats\\topostats\\default_config.yaml\nINFO topostats:run_modules.py:141 Scanning for images in : tests\\resources\\test_image\nINFO topostats:run_modules.py:142 Output directory : output\nINFO topostats:run_modules.py:143 Looking for images with extension : .topostats\nINFO topostats:run_modules.py:144 Images with extension .topostats in tests\\resources\\test_image : 1\nINFO topostats:run_modules.py:149 Thresholding method (Filtering) : std_dev\nINFO topostats:run_modules.py:150 Thresholding method (Grains) : std_dev\nINFO topostats:io.py:774 Extracting image from tests\\resources\\test_image\\minicircle_small.topostats\nINFO topostats:run_modules.py:437 [minicircle_small] Filtering completed.\nINFO topostats:processing.py:1459 \n\n~~~~~~~~~~...s Found : 1\n Successfully Processed^1 : 1 (100.0%)\n All statistics : output/all_statistics.csv\n Distribution Plots : Disabled. Enable in config 'summary_stats/run' if needed.\n\n Configuration : output/config.yaml\n\n Email : [email protected]\n Documentation : https://afm-

Process completed with exit code 1.

The action 'Setup tmate session' has timed out after 5 minutes.

invalid value encountered in scalar divide