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submitr/config/custom_column_mappings.json
to include properties for DSA as well as DuplexSeq ExternalQualityMetric itemsCUSTOM_COLUMN_MAPPINGS_LOCAL
to use the local version ofcustom_column_mappings
insubmitr
(rather than indcicutils/submitr
) when set toTrue
to help with testingNOTE: This is a temporary fix to allow submission of DSA_ExternalQualityMetric submission spreadsheets with
submitr
. Ideally, we would like to have this functionality moved over tosubmitr
and have the config information pulled from the portal with a query tosearch/?type=GenericQcConfig&tags=external_quality_metrics
, with the first returned item in search being the most recent version of the config. This may require movingsubmitr/custom_excel.py
over tosubmitr
as well.