DESCRIPTION

Package: gencoreSC
Title: ENPRC Genomics Core Single Cell Utility Functions
Version: 1.0.1
Authors@R: c(
    person("Micah", "Fletcher", , "mpfletc@emory.edu", role = c("aut", "cre")),
    person("Derrik", "Gratz", , "derrik.gratz@emory.edu", role = c("aut", "ctb"),
      comment = c(ORCID = "0009-0002-5934-576X"))
  )
Description: Convenience functions for single cell analyses.
License: MIT + file LICENSE
Imports:
    clustree,
    dplyr,
    forcats,
    ggplotify,
    ggplot2,
    ggpubr,
    ggridges,
    gtools,
    harmony,
    here,
    magrittr,
    Matrix,
    methods,
    pheatmap,
    openxlsx,
    plotly,
    plyr,
    reshape2,
    rlang,
    scater,
    scDblFinder,
    S4Vectors,
    Seurat,
    SeuratObject,
    SoupX,
    SingleR,
    SummarizedExperiment,
    stats,
    tibble,
    tidyr,
    utils,
    viridis,
    zeallot,
    scran
Suggests:
    BiocParallel,
    ggforce,
    ggh4x,
    hdf5r,
    knitr,
    MAST,
    rmarkdown,
    scales,
    STACAS,
    testthat (>= 3.0.0)
VignetteBuilder: 
    knitr
Remotes:
    github::carmonalab/STACAS,
biocViews: SingleR, scater, SummarizedExperiment
Encoding: UTF-8
Repository: github::yerkes-gencore/gencoreSC
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Config/testthat/edition: 3