Merge pull request #153 from wustl-oncology/pvac_mem

malachig · web-flow · commit 926e1f9496c0 · 2024-08-30T16:53:26.000-05:00
increase memory resources to accommodate BigMHC
diff --git a/definitions/tools/pvacfuse.wdl b/definitions/tools/pvacfuse.wdl
@@ -36,7 +36,7 @@ task pvacfuse {
     preemptible: 1
     maxRetries: 2
     docker: "griffithlab/pvactools:4.3.0"
-    memory: "16GB"
+    memory: "32GB"
     cpu: n_threads
     disks: "local-disk ~{space_needed_gb} HDD"
   }
diff --git a/definitions/tools/pvacseq.wdl b/definitions/tools/pvacseq.wdl
@@ -54,7 +54,7 @@ task pvacseq {
   runtime {
     preemptible: 1
     maxRetries: 2
-    memory: "16GB"
+    memory: "32GB"
     cpu: n_threads
     docker: "griffithlab/pvactools:4.3.0"
     disks: "local-disk ~{space_needed_gb} HDD"

Original file line number	Diff line number	Diff line change
`@@ -36,7 +36,7 @@ task pvacfuse {`
`36`	`36`	`preemptible: 1`
`37`	`37`	`maxRetries: 2`
`38`	`38`	`docker: "griffithlab/pvactools:4.3.0"`
`39`		`- memory: "16GB"`
	`39`	`+ memory: "32GB"`
`40`	`40`	`cpu: n_threads`
`41`	`41`	`disks: "local-disk ~{space_needed_gb} HDD"`
`42`	`42`	`}`