diff --git a/cdhit-utility.c++ b/cdhit-utility.c++ index 699991b..4d3f93d 100644 --- a/cdhit-utility.c++ +++ b/cdhit-utility.c++ @@ -52,7 +52,7 @@ char txt_option_g[] = \t(accurate but slow mode)\n \ \tbut either 1 or 0 won't change the representatives of final clusters\n"; char txt_option_b[] = "\tband_width of alignment, default 20\n"; -char txt_option_M[] = "\tmemory limit (in MB) for the program, default 800; 0 for unlimitted;\n"; +char txt_option_M[] = "\tmemory limit (in MB) for the program, default 800; 0 for unlimited;\n"; char txt_option_n[] = "\tword_length, default 5, see user's guide for choosing it\n"; char txt_option_n_est[] = "\tword_length, default 10, see user's guide for choosing it\n"; char txt_option_l[] = "\tlength of throw_away_sequences, default 10\n"; diff --git a/doc/cdhit-user-guide.wiki b/doc/cdhit-user-guide.wiki index a665477..dbba736 100644 --- a/doc/cdhit-user-guide.wiki +++ b/doc/cdhit-user-guide.wiki @@ -146,7 +146,7 @@ __**The most updated options are available from the command line version of the NOTE!!! don't use -G 0 unless you use alignment coverage controls see options -aL, -AL, -aS, -AS -b band_width of alignment, default 20 - -M memory limit (in MB) for the program, default 800; 0 for unlimitted; + -M memory limit (in MB) for the program, default 800; 0 for unlimited; -T number of threads, default 1; with 0, all CPUs will be used -n word_length, default 5, see user's guide for choosing it -l length of throw_away_sequences, default 10 @@ -285,7 +285,7 @@ Options: NOTE!!! don't use -G 0 unless you use alignment coverage controls see options -aL, -AL, -aS, -AS -b band_width of alignment, default 20 - -M memory limit (in MB) for the program, default 800; 0 for unlimitted; + -M memory limit (in MB) for the program, default 800; 0 for unlimited; -T number of threads, default 1; with 0, all CPUs will be used -n word_length, default 5, see user's guide for choosing it -l length of throw_away_sequences, default 10 @@ -384,7 +384,7 @@ Options: NOTE!!! don't use -G 0 unless you use alignment coverage controls see options -aL, -AL, -aS, -AS -b band_width of alignment, default 20 - -M memory limit (in MB) for the program, default 800; 0 for unlimitted; + -M memory limit (in MB) for the program, default 800; 0 for unlimited; -T number of threads, default 1; with 0, all CPUs will be used -n word_length, default 10, see user's guide for choosing it -l length of throw_away_sequences, default 10 @@ -491,7 +491,7 @@ Options: NOTE!!! don't use -G 0 unless you use alignment coverage controls see options -aL, -AL, -aS, -AS -b band_width of alignment, default 20 - -M memory limit (in MB) for the program, default 800; 0 for unlimitted; + -M memory limit (in MB) for the program, default 800; 0 for unlimited; -T number of threads, default 1; with 0, all CPUs will be used -n word_length, default 10, see user's guide for choosing it -l length of throw_away_sequences, default 10 @@ -577,7 +577,7 @@ Options: number of identical amino acids in alignment divided by the full length of the shorter sequence + gaps -b band_width of alignment, default 10 - -M memory limit (in MB) for the program, default 800; 0 for unlimitted; + -M memory limit (in MB) for the program, default 800; 0 for unlimited; -T number of threads, default 1; with 0, all CPUs will be used -n word_length, default 10, see user's guide for choosing it -aL alignment coverage for the longer sequence, default 0.0