DESCRIPTION

Package: MicrobiomeBenchmarkData
Title: Datasets for benchmarking in microbiome research
Version: 1.9.0
Description: The MicrobiomeBenchmarkData package provides functionality to 
    access microbiome datasets suitable for benchmarking. These datasets
    have some biological truth, which allows to have expected results for
    comparison. The datasets come from various published sources and
    are provided as TreeSummarizedExperiment objects. Currently, 
    only datasets suitable for benchmarking differential abundance
    methods are available.
Authors@R: 
    c(
        person(
            given = "Samuel", family = "Gamboa", 
            role = c("aut", "cre"),
            email = "Samuel.Gamboa.Tuz@gmail.com",
            comment = c(ORCID = "0000-0002-6863-7943")
        ),
        person(
            given = "Levi", family = "Waldron",
            role = c("aut"),
            comment = c(ORCID = "0000-0003-2725-0694")
        ),
        person("Marcel", "Ramos", role = "ctb")
    )
License: Artistic-2.0
LazyData: false 
Depends: 
    R (>= 4.2),
    SummarizedExperiment,
    TreeSummarizedExperiment
Imports:
    BiocFileCache,
    tools,
    S4Vectors,
    ape,
    utils
Suggests: 
    rmarkdown,
    knitr,
    BiocStyle,
    testthat (>= 3.0.0),
    mia,
    ggplot2,
    tidyr,
    dplyr,
    magrittr,
    tibble,
    purrr
biocViews:
    ExperimentData,
    MicrobiomeData,
    ReproducibleResearch,
    SequencingData
BugReports: https://github.com/waldronlab/MicrobiomeBenchmarkData/issues
URL: https://github.com/waldronlab/MicrobiomeBenchmarkData,
    http://waldronlab.io/MicrobiomeBenchmarkData/
BiocType: ExperimentData
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3