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Jeremiah Wala
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[ci skip] README update
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README.md

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@@ -87,12 +87,11 @@ provide excellent and high quality APIs. SeqLib provides further performance enh
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bioinformatics problems.
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Some differences:
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1. SeqLib has ~2-4x faster read/write speed over BamTools and SeqAn, and lower memory footprint.
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2. SeqLib has support for CRAM file
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3. SeqLib provides in memory access to BWA-MEM, BLAT, a chromosome aware interval tree and range operations, and to read correction and
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sequence assembly with Fermi. BamTools has more support currently for network access.
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4. SeqAn provide a substantial amount of additional capabilites not in SeqLib, including graph operations and a more expanded suite of multi-sequence alignments.
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5. BamTools has support for network access of BAMs.
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* SeqLib has ~2-4x faster read/write speed over BamTools and SeqAn, and lower memory footprint.
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* SeqLib has support for CRAM file
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* SeqLib provides in memory access to BWA-MEM, BLAT, a chromosome aware interval tree and range operations, and to read correction and sequence assembly with Fermi. BamTools has more support currently for network access.
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* SeqAn provide a substantial amount of additional capabilites not in SeqLib, including graph operations and a more expanded suite of multi-sequence alignments.
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* BamTools has support for network access of BAMs.
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For your particular application, our hope is that SeqLib will provide a comprehensive and powerful envrionment to develop
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bioinformatics tools. Feature requests and comments are welcomed.

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