From 7bc1342d9494ce80ffac70ead15efaa4ea66b30d Mon Sep 17 00:00:00 2001 From: jcschaff Date: Thu, 30 May 2024 19:47:24 -0400 Subject: [PATCH 1/2] update vcell-solvers to v0.8.0 across the board --- docker/build/Dockerfile-batch-dev | 2 +- docker/swarm/README.md | 2 +- pom.xml | 6 +++--- vcell-core/pom.xml | 4 ++-- 4 files changed, 7 insertions(+), 7 deletions(-) diff --git a/docker/build/Dockerfile-batch-dev b/docker/build/Dockerfile-batch-dev index 782ec57a48..db5ff49577 100644 --- a/docker/build/Dockerfile-batch-dev +++ b/docker/build/Dockerfile-batch-dev @@ -1,4 +1,4 @@ -FROM ghcr.io/virtualcell/vcell-solvers:v0.0.42-dev3 +FROM ghcr.io/virtualcell/vcell-solvers:v0.8.0 RUN apt-get -y update && \ apt-get install -y curl && \ diff --git a/docker/swarm/README.md b/docker/swarm/README.md index 961a5eebd4..5f492736fd 100644 --- a/docker/swarm/README.md +++ b/docker/swarm/README.md @@ -46,7 +46,7 @@ git tag ${theNewTag) //Push new tag to github, e.g. "git push origin v0.0.22" git push origin ${theNewTag) //github will alert travisci(mac,linux) and appveyor(win) to start building the tagged commit for client local solvers -//they will send their archived solvers to github and add to tagged commit (win64.zip,linux64.tgz,mac64.tgz) +//they will send their archived solvers to github and add to tagged commit (win64.zip,linux64.tgz,macos_x86_64.tgz) ``` diff --git a/pom.xml b/pom.xml index 9ded4540c8..0aeb1bff73 100644 --- a/pom.xml +++ b/pom.xml @@ -185,9 +185,9 @@ - v0.0.44-dev4 - v0.0.40 - v0.0.44-dev4 + v0.8.0 + v0.8.0 + v0.8.0 1.2.7 1.2.7 1.2.7 diff --git a/vcell-core/pom.xml b/vcell-core/pom.xml index abcbef912c..9c6c0901fd 100644 --- a/vcell-core/pom.xml +++ b/vcell-core/pom.xml @@ -664,7 +664,7 @@ wget - https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/mac64.tgz + https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/macos_x86_64.tgz true ${project.build.directory}/../../localsolvers/mac64 @@ -793,7 +793,7 @@ wget - https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/mac64.tgz + https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/macos_x86_64.tgz true ${project.build.directory}/../../localsolvers/mac64 From b29d8e26da1195c62824ee07bebff049b0abf4ea Mon Sep 17 00:00:00 2001 From: jcschaff Date: Thu, 30 May 2024 19:47:48 -0400 Subject: [PATCH 2/2] update Langevin solvers to 1.3.2 --- pom.xml | 6 +++--- vcell-core/pom.xml | 4 ++-- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/pom.xml b/pom.xml index 0aeb1bff73..8add0d6a6f 100644 --- a/pom.xml +++ b/pom.xml @@ -188,9 +188,9 @@ v0.8.0 v0.8.0 v0.8.0 - 1.2.7 - 1.2.7 - 1.2.7 + 1.3.2 + 1.3.2 + 1.3.2 diff --git a/vcell-core/pom.xml b/vcell-core/pom.xml index 9c6c0901fd..4f4ee4e254 100644 --- a/vcell-core/pom.xml +++ b/vcell-core/pom.xml @@ -688,7 +688,7 @@ wget - https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-latest + https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-13 ${project.build.directory}/../../localsolvers/mac64 langevin_x64 @@ -817,7 +817,7 @@ wget - https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-latest + https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-13 ${project.build.directory}/../../localsolvers/mac64 langevin_x64