diff --git a/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/LangevinApp.xml b/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/LangevinApp.xml index 794cbdde98..ad0d233d71 100644 --- a/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/LangevinApp.xml +++ b/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/LangevinApp.xml @@ -21,6 +21,7 @@ All the sites require several attribute, like diameter and relative position to one another. The reaction rules are strictly categorized and must obey several syntax restrictions. + diff --git a/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/SpringSaLaDTheory.xml b/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/SpringSaLaDTheory.xml index 8ea0dcfd08..afc0a7a2b6 100644 --- a/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/SpringSaLaDTheory.xml +++ b/vcell-client/UserDocumentation/originalXML/topics/ch_10/RuleBasedChapter/SpringSaLaDTheory.xml @@ -9,7 +9,7 @@ Yet another paragraph... ...with images inserted between paragraphs... - + diff --git a/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSReactionsSpecifications.xml b/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSReactionsSpecifications.xml index 8ecda7748f..cd57f4ed0f 100644 --- a/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSReactionsSpecifications.xml +++ b/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSReactionsSpecifications.xml @@ -17,6 +17,7 @@ The reactions are strictly categorized and must follow the template for their category. + diff --git a/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSSpeciesSpecifications.xml b/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSSpeciesSpecifications.xml index 734c3d9f4b..36c442460c 100644 --- a/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSSpeciesSpecifications.xml +++ b/vcell-client/UserDocumentation/originalXML/topics/ch_3/BioModelApplications/Specifications/SSSpeciesSpecifications.xml @@ -17,6 +17,7 @@ The reaction rules are strictly categorized and must obey several syntax restrictions. + diff --git a/vcell-client/UserDocumentation/originalXML/topics/image/SS_general.png b/vcell-client/UserDocumentation/originalXML/topics/image/SS_general.png new file mode 100644 index 0000000000..044a3cc5ac Binary files /dev/null and b/vcell-client/UserDocumentation/originalXML/topics/image/SS_general.png differ diff --git a/vcell-client/UserDocumentation/originalXML/topics/image/SS_new.png b/vcell-client/UserDocumentation/originalXML/topics/image/SS_new.png new file mode 100644 index 0000000000..815455bff1 Binary files /dev/null and b/vcell-client/UserDocumentation/originalXML/topics/image/SS_new.png differ diff --git a/vcell-client/UserDocumentation/originalXML/topics/image/SS_reactions.png b/vcell-client/UserDocumentation/originalXML/topics/image/SS_reactions.png new file mode 100644 index 0000000000..487fb70509 Binary files /dev/null and b/vcell-client/UserDocumentation/originalXML/topics/image/SS_reactions.png differ diff --git a/vcell-client/UserDocumentation/originalXML/topics/image/SS_species.png b/vcell-client/UserDocumentation/originalXML/topics/image/SS_species.png new file mode 100644 index 0000000000..c6cc113382 Binary files /dev/null and b/vcell-client/UserDocumentation/originalXML/topics/image/SS_species.png differ