diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml index 6ead021..09f19a6 100644 --- a/.github/workflows/publish.yml +++ b/.github/workflows/publish.yml @@ -1,38 +1,38 @@ -name: Render and deploy Quarto - -on: - push: - branches: main - -jobs: - build-deploy: - runs-on: ubuntu-latest - permissions: - contents: write - steps: - - name: Check out repository - uses: actions/checkout@v2 - - - name: Set up Quarto - uses: quarto-dev/quarto-actions/setup@v2 - - - name: Install R - uses: r-lib/actions/setup-r@v2 - with: - r-version: '4.2.0' - - - name: Install R Dependencies - uses: r-lib/actions/setup-renv@v2 - with: - cache-version: 1 - - - name: Install curl for Bioconductor - run: | - sudo apt -y install libcurl4-openssl-dev - - - name: Render and Publish - uses: quarto-dev/quarto-actions/publish@v2 - with: - target: gh-pages - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} +name: Render and deploy Quarto + +on: + push: + branches: main + +jobs: + build-deploy: + runs-on: ubuntu-latest + permissions: + contents: write + steps: + - name: Check out repository + uses: actions/checkout@v2 + + - name: Set up Quarto + uses: quarto-dev/quarto-actions/setup@v2 + + - name: Install R + uses: r-lib/actions/setup-r@v2 + with: + r-version: '4.4.0' + + - name: Install R Dependencies + uses: r-lib/actions/setup-renv@v2 + with: + cache-version: 1 + + - name: Install curl for Bioconductor + run: | + sudo apt -y install libcurl4-openssl-dev + + - name: Render and Publish + uses: quarto-dev/quarto-actions/publish@v2 + with: + target: gh-pages + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/renv.lock b/renv.lock index d317da3..ee05806 100644 --- a/renv.lock +++ b/renv.lock @@ -9,17 +9,6 @@ ] }, "Packages": { - "DBI": { - "Package": "DBI", - "Version": "1.2.3", - "Source": "Repository", - "Repository": "CRAN", - "Requirements": [ - "R", - "methods" - ], - "Hash": "065ae649b05f1ff66bb0c793107508f5" - }, "EnvStats": { "Package": "EnvStats", "Version": "2.8.1", @@ -48,22 +37,6 @@ ], "Hash": "2f342c46163b0b54d7b64d1f798e2c78" }, - 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