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makeblastdb error #122

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eliaswip opened this issue Oct 7, 2024 · 1 comment
Open

makeblastdb error #122

eliaswip opened this issue Oct 7, 2024 · 1 comment

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@eliaswip
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eliaswip commented Oct 7, 2024

When I try to run the
gunzip -c rnacentral_species_specific_ids.fasta.gz | makeblastdb -in - -dbtype nucl -parse_seqids -out rnacentral.fasta -title "RNACentral"

command as part of the installation, I get the following error:
BLAST Database error: Database memory map file error

Same apperas when first unzipping and subsequently trying to run makeblastdb

I am thankful for any help

@eliaswip
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eliaswip commented Oct 8, 2024

Problem solved. It was an permissio issue, as the folder i was working in was edited by root and i was working with another user.

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