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Add support for _alt chromosomes #5

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matthdsm opened this issue Sep 22, 2022 · 0 comments
Open

Add support for _alt chromosomes #5

matthdsm opened this issue Sep 22, 2022 · 0 comments

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@matthdsm
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Hi,

Would it be possible to add "support" for _alt chromosomes? This can be achieved by adding the read count of the _alts to their canonical couterparts. Without this step, you get an messed up image when aligned to a full hg38 reference.

Matthias
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@matthdsm