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screenshots.md

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Seqfu splash screens

count

seqfu count --help

stats

seqfu stats --help

derep

seqfu derep --help

interleave

seqfu interleave --help

deinterleave

seqfu deinterleave --help

metadata

seqfu metadata --help

cat

seqfu cat --help

grep

seqfu grep --help

head

seqfu head --help

tail

seqfu tail --help

view

seqfu view --help seqfu view data/primers/small.fq -o CCTACGGGAG -r ATGAGCGTCTCG

seqfu view data/qualities.fq

seqfu view data/qualities.fq

seqfu view --ascii data/qualities.fq

seqfu view --ascii data/qualities.fq

seqfu view --qual-chars data/qualities.fq seqfu view --qual-chars data/qualities.fq

rc

seqfu rc --help

tab

seqfu tab --help

lanes

seqfu lanes --help

rotate

seqfu rotate --help

fu-orf

fu-orf --help

fu-nanotags

fu-nanotags --help

fu-split

pwd && find .. -name "msa.*"

fu-split

fu-split --help

fu-msa

fu-msa ./data/msa.fa --screenshot

fu-msa ./data/msa.faa --screenshot