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docs/ONT.md
@@ -4,8 +4,8 @@ This pipeline expects input bed files of the following format, which we define
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as 'bedmethyl' format (standard output of ONT's
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[modkit](https://github.com/nanoporetech/modkit)):
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-|Chromosome|Start|End|Methylation type|Coverage|Strand|Percent methylation|
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-|----------|-----|---|----------------|--------|------|-------------------|
+|Chromosome|Start|End|Mark name (m or h)|Read depth|Strand|Percent methylation|
+|----------|-----|---|------------------|----------|------|-------------------|
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These scripts have been created in an attempt to binarize the methylation and
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hydroxymethylation calls that come out of ONT data. The process is split into
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