Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ERROR while installing Piranha #20

Open
usertiste opened this issue May 7, 2024 · 0 comments
Open

ERROR while installing Piranha #20

usertiste opened this issue May 7, 2024 · 0 comments

Comments

@usertiste
Copy link

I am trying to install piranha but I keep getting this error:
#############################################
############## REGRESSION TESTS ##############
##############################################

Running 'Binning test BED ztnbr'... [exec..][failed]
Running 'Binning test BED ztnbr pre-binned'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'Binning test BED'... [exec..][passed]
Running 'Binning test BED pre-binned'... [exec..][passed]
Running 'Simple ZTNB Test 1'... [exec..][passed]
Running 'Simple ZTNB Test 1, default sig.'... [exec..][passed]
Running 'Simple ZTNB Test 2, corrected pvals'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'Simple ZTNB Test 2'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'Simple ZTNB Test 3'... [exec..][passed]
Running 'Simple NB Test'... [exec..][passed]
Running 'Simple Poisson Test 1'... [exec..][passed]
Running 'Simple Poisson Test 2'... [exec..]An error occurred: [Errno 10] No child processes
Running 'Simple ZTP Test'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'Simple ZTP Test'... [exec..][passed]
Running 'Poisson Regression Test'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'Poisson Regression Test 2'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'NB Regression Test'... [exec..][passed]
Running 'ZTNB Regression Test'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'ZTP Regression Test'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'NB Regression Test 2'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'ZTNB Regression Test 2'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'ZTP Regression Test 2'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'ZTNB Regression Test 3'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper
Running 'ZTNB Regression Test 4'... [exec..][passed]
Running 'Simple ZTNB Test 5, preserving the strand'... [exec..][passed]
Running 'ZTNB Regression Test 5, preserving the strand'... [exec..][failed]
An error occurred: expected str, bytes or os.PathLike object, not _io.TextIOWrapper

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant