From 742e6d895ec0f6b25e1baa7df6ff5a92d7a05e0e Mon Sep 17 00:00:00 2001 From: Sigve Nakken Date: Thu, 16 Jun 2022 13:31:25 +0200 Subject: [PATCH] =?UTF-8?q?Bump=20version:=201.1.0=20=E2=86=92=201.1.1?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .bumpversion.cfg | 2 +- .github/workflows/pkgdown.yaml | 2 +- DESCRIPTION | 2 +- README.md | 2 +- pkgdown/index.md | 2 +- vignettes/installation.Rmd | 2 +- 6 files changed, 6 insertions(+), 6 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index 44d126a..1f7a8ac 100755 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 1.1.0 +current_version = 1.1.1 commit = True tag = False diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml index 678b710..a4a9ecb 100644 --- a/.github/workflows/pkgdown.yaml +++ b/.github/workflows/pkgdown.yaml @@ -8,7 +8,7 @@ on: workflow_dispatch: env: - VERSION: '1.1.0' #versioned by bump2version + VERSION: '1.1.1' #versioned by bump2version name: pkgdown diff --git a/DESCRIPTION b/DESCRIPTION index 864bcfe..dd995df 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: oncoEnrichR Type: Package Title: Cancer-dedicated gene set interpretation -Version: 1.1.0 +Version: 1.1.1 Date: 2022-06-15 Authors@R: c(person(given = "Sigve", diff --git a/README.md b/README.md index 2f67ff5..ab6c582 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ **oncoEnrichR** is an R package for functional interrogation of human gene lists in the context of cancer. The package leverages an extensive amount of prior molecular knowledge that allows for biological interpretation along multiple dimensions, both at the systems level and at the level of individual genes. -Web-based access to **oncoEnrichR** is available at [**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.1.0) +Web-based access to **oncoEnrichR** is available at [**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.1.1) **oncoEnrichR** is primarily intended for exploratory analysis and prioritization of a gene list (referred to here as **query set**) from high-throughput cancer biology experiments, e.g. CRISPR screens, protein proximity labeling, or gene expression profiling. The tool queries a number of high-quality data resources in order to assemble cancer-relevant annotations and analyses in an interactive report. diff --git a/pkgdown/index.md b/pkgdown/index.md index 234e256..68b41c0 100644 --- a/pkgdown/index.md +++ b/pkgdown/index.md @@ -21,7 +21,7 @@ data resources in order to assemble useful gene annotations and analyses in an interactive report (examples from the report shown below). Web-based access to **oncoEnrichR** is available at -[**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.1.0) +[**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.1.1)
diff --git a/vignettes/installation.Rmd b/vignettes/installation.Rmd index 8fc65ce..e9dffb6 100644 --- a/vignettes/installation.Rmd +++ b/vignettes/installation.Rmd @@ -4,5 +4,5 @@ output: rmarkdown::html_document --- 1. `install.packages('devtools')` -2. `devtools::install_github('sigven/oncoEnrichR', ref = "v1.1.0")` +2. `devtools::install_github('sigven/oncoEnrichR', ref = "v1.1.1")` 3. `library(oncoEnrichR)`