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$ python3 -m vcztools query performance/data/sim_10k.vcz -f '%POS\t%GT\n' | head
245 <map object at 0x7f9e5c0e3190>
427 <map object at 0x7f9e5c0e2590>
479 <map object at 0x7f9e6a86c5b0>
571 <map object at 0x7f9e6a86c850>
689 <map object at 0x7f9e5c0e2350>
712 <map object at 0x7f9e6a86c7f0>
719 <map object at 0x7f9e5c2747f0>
737 <map object at 0x7f9e6a86c7c0>
961 <map object at 0x7f9e5c0e2590>
996 <map object at 0x7f9e6a86c850>
Correct output is:
$ bcftools query performance/data/sim_10k.vcf.gz -f '%POS\t%GT\n'
Error: no such tag defined in the VCF header: INFO/GT. FORMAT fields must be enclosed in square brackets, e.g. "[ %GT]"
The text was updated successfully, but these errors were encountered:
Correct output is:
The text was updated successfully, but these errors were encountered: