NAMESPACE

# Generated by roxygen2: do not edit by hand

export(checkCDR3)
export(check_nucleotides)
export(coldspotCountDist)
export(findMissingColumns)
export(fullCheckNonProductiveSeqs)
export(gcContentDistribution)
export(getColdspotCountDistribution)
export(getGCContentDistribution)
export(getGeneAlleleStat)
export(getHotspotCountDistribution)
export(getVCalls)
export(hotspotCountDist)
export(plotVgeneDist)
export(printParams)
export(render_report)
export(repcredWeb)
export(repcred_report)
import(alakazam)
import(bookdown)
import(dplyr)
import(ggplot2)
import(knitr)
import(optparse)
import(rmarkdown)
import(shiny)
import(stringi)
import(stringr)
import(tidyr)
import(xfun)
importFrom(Biostrings,DNAString)
importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,nucleotideSubstitutionMatrix)
importFrom(Biostrings,pairwiseAlignment)
importFrom(Biostrings,reverseComplement)
importFrom(Biostrings,vcountPattern)
importFrom(airr,read_rearrangement)
importFrom(airr,validate_airr)
importFrom(airr,write_rearrangement)
importFrom(ape,GC.content)
importFrom(ape,as.DNAbin)
importFrom(data.table,.SD)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(ggpubr,theme_pubclean)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,barplot)
importFrom(graphics,hist)
importFrom(kableExtra,kbl)
importFrom(knitr,kable)
importFrom(stats,na.omit)
importFrom(stats,quantile)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,start)
importFrom(utils,head)