test uv for docs (#305)

* test uv * test different install * add system * test python3.11 * update install * undo toml * test hatch env * test without frozen * last test * add system * update command * adjust comment --------- Co-authored-by: Philipp A. <[email protected]>
scverse · Dec 10, 2024 · 247e871 · 247e871
1 parent 8d949ca
commit 247e871
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diff --git a/.readthedocs.yml b/.readthedocs.yml
@@ -1,16 +1,23 @@
 version: 2
 submodules:
   include: all
+
 build:
   os: ubuntu-24.04
   tools:
-    python: '3.12'
+    python: "3.12"
+  commands:
+    # Install and set up uv
+    - asdf plugin add uv
+    - asdf install uv latest
+    - asdf global uv latest
+
+    # Use uv to synchronize dependencies
+    - uv pip install --system .[doc]
+
+    # Build documentation using sphinx
+    - python -m sphinx -T -b html -d docs/_build/doctrees -D language=en docs $READTHEDOCS_OUTPUT/html
+
 sphinx:
   configuration: docs/conf.py
   fail_on_warning: true
-python:
-  install:
-  - method: pip
-    path: .
-    extra_requirements:
-    - doc
diff --git a/hatch.toml b/hatch.toml
@@ -0,0 +1,11 @@
+[envs.default]
+installer = "uv"
+features = ["dev"]
+
+[envs.hatch-test]
+features = ["test", "rapids12"]
+
+[envs.docs]
+features = ["doc"]
+scripts.build = "sphinx-build -M html docs docs/_build {args}"
+scripts.clean = "git clean -fXd docs"
diff --git a/pyproject.toml b/pyproject.toml
@@ -101,15 +101,6 @@ markers = [
     "gpu: tests that use a GPU (currently unused, but needs to be specified here as we import anndata.tests.helpers, which uses it)",
 ]
 
-[tool.hatch.envs.hatch-test]
-features = ["test", "rapids12"]
-
-[tool.hatch.envs.docs]
-installer = "uv"
-features = ["doc"]
-scripts.build = "sphinx-build -M html docs docs/_build {args}"
-scripts.clean = "git clean -fXd docs"
-
 [tool.hatch.build]
 # exclude big files that don’t need to be installed
 exclude = [