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Test data location #314

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muffato opened this issue Aug 16, 2024 · 1 comment
Open

Test data location #314

muffato opened this issue Aug 16, 2024 · 1 comment
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enhancement New feature or request

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@muffato
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muffato commented Aug 16, 2024

Description of feature

Hiya,

For maintainability, it would help if the following archives could exist untarred under /lustre/scratch123/tol/resources/nextflow/test-data:

./resources/ascc/asccTinyTest_V2.tar.gz
./resources/ascc/asccTinyTest.tar.gz
./resources/treeval/TreeValTinyData.tar.gz
./resources/treeval/TreeValSmallData.tar.gz

The untarring itself I could do, but it's more about sorting out the source location of those test data across all developers.

Also, the datasets should also be versioned so that updating the test data doesn't break tests of previous releases.

(I guess this also applies to some extent to ascc, curationpretext, and longreadmag)

@muffato muffato added the enhancement New feature or request label Aug 16, 2024
@muffato
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muffato commented Aug 16, 2024

I just found that the untarred data are under /lustre/scratch123/tol/resources/treeval/treeval-testdata

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