diff --git a/.github/scripts/clean-database.py b/.github/scripts/clean-database.py new file mode 100755 index 000000000..e4bc4605e --- /dev/null +++ b/.github/scripts/clean-database.py @@ -0,0 +1,129 @@ +#!/usr/bin/env python3 + +import json +import os +import fnmatch +import requests +import shutil +import sys +import time + + +def recursive_find(base, pattern="*.json"): + """recursive find will yield python files in all directory levels + below a base path. + + Arguments: + - base (str) : the base directory to search + - pattern: a pattern to match, defaults to *.py + """ + for root, _, filenames in os.walk(base): + for filename in fnmatch.filter(filenames, pattern): + yield os.path.join(root, filename) + + +def read_json(path): + """ + Read json into dict! + """ + with open(path, "r") as fd: + content = json.loads(fd.read()) + return content + + +def save_json(meta, path): + with open(path, "w") as fd: + fd.write(json.dumps(meta, indent=4)) + + +def clean(repos_file, database, archive): + """ + Clean the database + """ + # Read in repos.txt and remove archived + with open(repos_file, "r") as fd: + subset = fd.readlines() + + with open("repos.txt", "r") as fd: + repos = fd.readlines() + + repos = set([x.strip() for x in repos if x.strip()]) + subset = set([x.strip() for x in subset if x.strip()]) + + for path in recursive_find(database, "*metadata.json"): + meta = read_json(path) + relpath = os.path.relpath(path, database) + + # Ensure UID is correct + uid = meta["url"].rsplit("/", 3) + uid = "/".join(uid[1:]).replace(".com", "") + + # Only look at subset + if uid not in subset: + continue + + # Spurious bug with empty url + if meta["url"] is None: + meta["url"] = meta["data"]["url"] + save_json(meta, path) + + try: + res = requests.head(meta.get("html_url") or meta.get("url")) + except: + print("Issue with {path}") + continue + + if res.status_code == 200: + continue + + elif res.status_code == 404: + print(f"Found repository no longer present at {relpath}, archiving") + newpath = os.path.join(archive, relpath) + newdir = os.path.dirname(newpath) + shutil.move(os.path.dirname(path), newdir) + uid = os.path.dirname(relpath) + if uid in repos: + repos.remove(uid) + + elif res.status_code in [301, 302]: + print(f"Found repository {relpath} with moved location, updating") + new_location = requests.head(res.headers["Location"]) + meta["url"] = new_location.url + save_json(meta, path) + + if uid not in relpath: + old_uid = os.path.dirname(relpath) + shutil.move(os.path.dirname(path), os.path.join(database, uid)) + print(f"{relpath} should be {uid}") + if old_uid in repos: + repos.remove(old_uid) + repos.add(uid) + + # Save back to file + # This largely isn't needed because we re-generate with export + # But might as well try to maintain consistency here. + with open("repos.txt", "w") as fd: + fd.write("\n".join(list(repos))) + + +def main(): + + # python .github/scripts/clean-database.py $(pwd) + if len(sys.argv) < 3: + sys.exit( + "Please provide a root path (with the database and argument) and a text file of repos." + ) + + root = os.path.abspath(sys.argv[1]) + repos_file = os.path.abspath(sys.argv[2]) + database = os.path.join(root, "database") + archive = os.path.join(root, "archive") + for path in database, archive: + if not os.path.exists(path): + sys.exit(f"{path} does not exist.") + + clean(repos_file, database, archive) + + +if __name__ == "__main__": + main() diff --git a/.github/workflows/clean.yaml b/.github/workflows/clean.yaml new file mode 100644 index 000000000..1e8ceeaae --- /dev/null +++ b/.github/workflows/clean.yaml @@ -0,0 +1,83 @@ +name: clean-software + +on: + workflow_dispatch: + pull_request: [] + schedule: + # Weekly + - cron: 0 7 * * 0 + +jobs: + clean: + runs-on: ubuntu-latest + steps: + - name: Checkout Repository + uses: actions/checkout@v3 + - name: Install Research Software Encyclopedia + run: | + sudo apt-get update && sudo apt-get install -y python3 python3-pip python3-setuptools + git clone https://github.com/rseng/rse /tmp/rse + cd /tmp/rse + sudo pip3 install .[all] + rse --version + + # Run a specific letter matched to a day of the month A==1, Z==26 + - name: Calendar Updater + uses: vsoch/split-list-action@main + with: + ids_file: repos.txt + outfile: repos-subset.txt + + # One letter assigned to each day + calendar_split: true + + - name: Clean Repos Subset + env: + RSE_GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + run: | + python .github/scripts/clean-database.py $(pwd) repos-subset.txt + rse export repos.txt --force + + - name: Export site to docs/ + uses: rseng/rse-action@0.0.13 + with: + config: rse.ini + export_dir: docs + force: true + prefix: software + host: https://rseng.github.io + + - name: Checkout New Branch + if: (github.event_name == 'pull_request') + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + BRANCH_AGAINST: "master" + run: | + printf "GitHub Actor: ${GITHUB_ACTOR}\n" + export BRANCH_FROM="update/software-$(date '+%Y-%m-%d')" + git remote set-url origin "https://x-access-token:${GITHUB_TOKEN}@github.com/${GITHUB_REPOSITORY}.git" + git branch + git checkout -b "${BRANCH_FROM}" || git checkout "${BRANCH_FROM}" + git branch + + git config --global user.name "github-actions" + git config --global user.email "github-actions@users.noreply.github.com" + + git add database/* + git add docs/* + + if git diff-index --quiet HEAD --; then + printf "No changes\n" + else + printf "Changes\n" + git commit -m "Automated deployment to update software database $(date '+%Y-%m-%d')" + git push origin "${BRANCH_FROM}" + fi + echo "PULL_REQUEST_FROM_BRANCH=${BRANCH_FROM}" >> $GITHUB_ENV + + - name: Open Pull Request + if: (github.event_name == 'pull_request') + uses: vsoch/pull-request-action@master + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + PULL_REQUEST_BRANCH: "master" diff --git a/README.md b/README.md index 90f28e6d5..1a3200279 100644 --- a/README.md +++ b/README.md @@ -71,8 +71,11 @@ rse export --type static-web docs/ rse export --type static-web docs/ --force # if exists ``` -Further, a static API is exported to [https://rseng.github.io/software/data.json](https://rseng.github.io/software/data.json) that provides a listing of your software repositories -for some programmatic usage. +Further, a static API is exported to [https://rseng.github.io/software/data.json](https://rseng.github.io/software/data.json) that provides a listing of your software repositories for some programmatic usage. We also clean (and [archive](archive)) repositories that are no longer found: + +```bash +$ python .github/scripts/clean-database.py $(pwd) +``` # Development Work diff --git a/database/github/LSARP/ProteomicsQC/metadata.json b/archive/github/LSARP/ProteomicsQC/metadata.json similarity index 100% rename from database/github/LSARP/ProteomicsQC/metadata.json rename to archive/github/LSARP/ProteomicsQC/metadata.json diff --git a/database/github/cran/irtplay/metadata.json b/archive/github/cran/irtplay/metadata.json similarity index 100% rename from database/github/cran/irtplay/metadata.json rename to archive/github/cran/irtplay/metadata.json diff --git a/database/github/csbioinfopk/iSumoK-PseAAC/metadata.json b/archive/github/csbioinfopk/iSumoK-PseAAC/metadata.json similarity index 100% rename from database/github/csbioinfopk/iSumoK-PseAAC/metadata.json rename to archive/github/csbioinfopk/iSumoK-PseAAC/metadata.json diff --git a/database/github/iopenshell/ezSpectrum/metadata.json b/archive/github/iopenshell/ezSpectrum/metadata.json similarity index 100% rename from database/github/iopenshell/ezSpectrum/metadata.json rename to archive/github/iopenshell/ezSpectrum/metadata.json diff --git a/database/github/zhwm/SparsePro_Paper/metadata.json b/archive/github/zhwm/SparsePro_Paper/metadata.json similarity index 100% rename from database/github/zhwm/SparsePro_Paper/metadata.json rename to archive/github/zhwm/SparsePro_Paper/metadata.json diff --git a/database/github/21cmFAST/21cmFAST/metadata.json b/database/github/21cmfast/21cmFAST/metadata.json similarity index 100% rename from database/github/21cmFAST/21cmFAST/metadata.json rename to database/github/21cmfast/21cmFAST/metadata.json diff --git a/database/github/3D-e-Chem/3D-e-Chem-VM/metadata.json b/database/github/3D-e-Chem/3D-e-Chem-VM/metadata.json index a5aa60ff7..8269ea794 100644 --- a/database/github/3D-e-Chem/3D-e-Chem-VM/metadata.json +++ b/database/github/3D-e-Chem/3D-e-Chem-VM/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/3D-e-Chem-VM", - "url": "https://api.github.com/repos/3D-e-Chem/3D-e-Chem-VM", + "url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", "data": { "timestamp": "2020-07-05 00:17:07.943003", "name": "3D-e-Chem-VM", - "url": "https://api.github.com/repos/3D-e-Chem/3D-e-Chem-VM", + "url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", "full_name": "3D-e-Chem/3D-e-Chem-VM", "html_url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.594559", "name": "3D-e-Chem-VM", "full_name": "3D-e-Chem/3D-e-Chem-VM", - "html_url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", "private": false, "description": "Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows", "created_at": "2016-01-11T21:10:05Z", diff --git a/database/github/3D-e-Chem/knime-gpcrdb/metadata.json b/database/github/3D-e-Chem/knime-gpcrdb/metadata.json index 507ad0c69..648e6683d 100644 --- a/database/github/3D-e-Chem/knime-gpcrdb/metadata.json +++ b/database/github/3D-e-Chem/knime-gpcrdb/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-gpcrdb", - "url": "https://api.github.com/repos/3D-e-Chem/knime-gpcrdb", + "url": "https://github.com/3D-e-Chem/knime-gpcrdb", "data": { "timestamp": "2020-07-05 00:17:14.880978", "name": "knime-gpcrdb", - "url": "https://api.github.com/repos/3D-e-Chem/knime-gpcrdb", + "url": "https://github.com/3D-e-Chem/knime-gpcrdb", "full_name": "3D-e-Chem/knime-gpcrdb", "html_url": "https://github.com/3D-e-Chem/knime-gpcrdb", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597174", "name": "knime-gpcrdb", "full_name": "3D-e-Chem/knime-gpcrdb", - "html_url": "https://github.com/3D-e-Chem/knime-gpcrdb", "private": false, "description": "GPCRDB nodes for Knime", "created_at": "2016-01-12T13:31:10Z", diff --git a/database/github/3D-e-Chem/knime-klifs/metadata.json b/database/github/3D-e-Chem/knime-klifs/metadata.json index 8cd8a6aa7..ae5c50cf6 100644 --- a/database/github/3D-e-Chem/knime-klifs/metadata.json +++ b/database/github/3D-e-Chem/knime-klifs/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-klifs", - "url": "https://api.github.com/repos/3D-e-Chem/knime-klifs", + "url": "https://github.com/3D-e-Chem/knime-klifs", "data": { "timestamp": "2020-07-05 00:17:15.027377", "name": "knime-klifs", - "url": "https://api.github.com/repos/3D-e-Chem/knime-klifs", + "url": "https://github.com/3D-e-Chem/knime-klifs", "full_name": "3D-e-Chem/knime-klifs", "html_url": "https://github.com/3D-e-Chem/knime-klifs", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.595324", "name": "knime-klifs", "full_name": "3D-e-Chem/knime-klifs", - "html_url": "https://github.com/3D-e-Chem/knime-klifs", "private": false, "description": "Knime nodes to interact with KLIFS", "created_at": "2016-05-11T11:00:29Z", diff --git a/database/github/3D-e-Chem/knime-kripodb/metadata.json b/database/github/3D-e-Chem/knime-kripodb/metadata.json index c919c8914..42250ec27 100644 --- a/database/github/3D-e-Chem/knime-kripodb/metadata.json +++ b/database/github/3D-e-Chem/knime-kripodb/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-kripodb", - "url": "https://api.github.com/repos/3D-e-Chem/knime-kripodb", + "url": "https://github.com/3D-e-Chem/knime-kripodb", "data": { "timestamp": "2020-07-05 00:17:06.490235", "name": "knime-kripodb", - "url": "https://api.github.com/repos/3D-e-Chem/knime-kripodb", + "url": "https://github.com/3D-e-Chem/knime-kripodb", "full_name": "3D-e-Chem/knime-kripodb", "html_url": "https://github.com/3D-e-Chem/knime-kripodb", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597262", "name": "knime-kripodb", "full_name": "3D-e-Chem/knime-kripodb", - "html_url": "https://github.com/3D-e-Chem/knime-kripodb", "private": false, "description": "Knime node for KripoDB package", "created_at": "2016-02-12T11:12:39Z", diff --git a/database/github/3D-e-Chem/knime-molviewer/metadata.json b/database/github/3D-e-Chem/knime-molviewer/metadata.json index f482cdffb..01a34251f 100644 --- a/database/github/3D-e-Chem/knime-molviewer/metadata.json +++ b/database/github/3D-e-Chem/knime-molviewer/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-molviewer", - "url": "https://api.github.com/repos/3D-e-Chem/knime-molviewer", + "url": "https://github.com/3D-e-Chem/knime-molviewer", "data": { "timestamp": "2020-07-05 00:17:15.191079", "name": "knime-molviewer", - "url": "https://api.github.com/repos/3D-e-Chem/knime-molviewer", + "url": "https://github.com/3D-e-Chem/knime-molviewer", "full_name": "3D-e-Chem/knime-molviewer", "html_url": "https://github.com/3D-e-Chem/knime-molviewer", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597231", "name": "knime-molviewer", "full_name": "3D-e-Chem/knime-molviewer", - "html_url": "https://github.com/3D-e-Chem/knime-molviewer", "private": false, "description": "KNIME node which launches a web browser with moleculer viewer powered by webgl", "created_at": "2016-08-12T19:13:57Z", diff --git a/database/github/3D-e-Chem/knime-pharmacophore/metadata.json b/database/github/3D-e-Chem/knime-pharmacophore/metadata.json index 3aa67e67a..644dfed89 100644 --- a/database/github/3D-e-Chem/knime-pharmacophore/metadata.json +++ b/database/github/3D-e-Chem/knime-pharmacophore/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-pharmacophore", - "url": "https://api.github.com/repos/3D-e-Chem/knime-pharmacophore", + "url": "https://github.com/3D-e-Chem/knime-pharmacophore", "data": { "timestamp": "2020-07-05 00:17:06.675589", "name": "knime-pharmacophore", - "url": "https://api.github.com/repos/3D-e-Chem/knime-pharmacophore", + "url": "https://github.com/3D-e-Chem/knime-pharmacophore", "full_name": "3D-e-Chem/knime-pharmacophore", "html_url": "https://github.com/3D-e-Chem/knime-pharmacophore", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.997332", "name": "knime-pharmacophore", "full_name": "3D-e-Chem/knime-pharmacophore", - "html_url": "https://github.com/3D-e-Chem/knime-pharmacophore", "private": false, "description": "KNIME nodes to read/write pharmacophore files", "created_at": "2017-06-23T15:10:14Z", diff --git a/database/github/3D-e-Chem/knime-plants/metadata.json b/database/github/3D-e-Chem/knime-plants/metadata.json index 51d9b4fc9..dccdacdac 100644 --- a/database/github/3D-e-Chem/knime-plants/metadata.json +++ b/database/github/3D-e-Chem/knime-plants/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-plants", - "url": "https://api.github.com/repos/3D-e-Chem/knime-plants", + "url": "https://github.com/3D-e-Chem/knime-plants", "data": { "timestamp": "2020-07-05 00:17:06.840344", "name": "knime-plants", - "url": "https://api.github.com/repos/3D-e-Chem/knime-plants", + "url": "https://github.com/3D-e-Chem/knime-plants", "full_name": "3D-e-Chem/knime-plants", "html_url": "https://github.com/3D-e-Chem/knime-plants", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.997272", "name": "knime-plants", "full_name": "3D-e-Chem/knime-plants", - "html_url": "https://github.com/3D-e-Chem/knime-plants", "private": false, "description": "KNIME nodes to configure, run and analyze PLANTS protein-ligand docking", "created_at": "2016-11-29T09:55:05Z", diff --git a/database/github/3D-e-Chem/knime-python-node-archetype/metadata.json b/database/github/3D-e-Chem/knime-python-node-archetype/metadata.json index bf26a194e..787bf856e 100644 --- a/database/github/3D-e-Chem/knime-python-node-archetype/metadata.json +++ b/database/github/3D-e-Chem/knime-python-node-archetype/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-python-node-archetype", - "url": "https://api.github.com/repos/3D-e-Chem/knime-python-node-archetype", + "url": "https://github.com/3D-e-Chem/knime-python-node-archetype", "data": { "timestamp": "2020-07-05 00:17:07.000894", "name": "knime-python-node-archetype", - "url": "https://api.github.com/repos/3D-e-Chem/knime-python-node-archetype", + "url": "https://github.com/3D-e-Chem/knime-python-node-archetype", "full_name": "3D-e-Chem/knime-python-node-archetype", "html_url": "https://github.com/3D-e-Chem/knime-python-node-archetype", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597226", "name": "knime-python-node-archetype", "full_name": "3D-e-Chem/knime-python-node-archetype", - "html_url": "https://github.com/3D-e-Chem/knime-python-node-archetype", "private": false, "description": "Knime Python node archetype", "created_at": "2016-07-11T15:36:03Z", diff --git a/database/github/3D-e-Chem/knime-python-wrapper/metadata.json b/database/github/3D-e-Chem/knime-python-wrapper/metadata.json index 507e659cb..a7c604b66 100644 --- a/database/github/3D-e-Chem/knime-python-wrapper/metadata.json +++ b/database/github/3D-e-Chem/knime-python-wrapper/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-python-wrapper", - "url": "https://api.github.com/repos/3D-e-Chem/knime-python-wrapper", + "url": "https://github.com/3D-e-Chem/knime-python-wrapper", "data": { "timestamp": "2020-07-05 00:17:07.148367", "name": "knime-python-wrapper", - "url": "https://api.github.com/repos/3D-e-Chem/knime-python-wrapper", + "url": "https://github.com/3D-e-Chem/knime-python-wrapper", "full_name": "3D-e-Chem/knime-python-wrapper", "html_url": "https://github.com/3D-e-Chem/knime-python-wrapper", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597238", "name": "knime-python-wrapper", "full_name": "3D-e-Chem/knime-python-wrapper", - "html_url": "https://github.com/3D-e-Chem/knime-python-wrapper", "private": false, "description": "Utilities for development of KNIME nodes calling Python scripts.", "created_at": "2016-07-11T12:11:54Z", diff --git a/database/github/3D-e-Chem/knime-silicos-it/metadata.json b/database/github/3D-e-Chem/knime-silicos-it/metadata.json index 10cc9cb59..90147d469 100644 --- a/database/github/3D-e-Chem/knime-silicos-it/metadata.json +++ b/database/github/3D-e-Chem/knime-silicos-it/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-silicos-it", - "url": "https://api.github.com/repos/3D-e-Chem/knime-silicos-it", + "url": "https://github.com/3D-e-Chem/knime-silicos-it", "data": { "timestamp": "2020-07-05 00:17:07.332748", "name": "knime-silicos-it", - "url": "https://api.github.com/repos/3D-e-Chem/knime-silicos-it", + "url": "https://github.com/3D-e-Chem/knime-silicos-it", "full_name": "3D-e-Chem/knime-silicos-it", "html_url": "https://github.com/3D-e-Chem/knime-silicos-it", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597793", "name": "knime-silicos-it", "full_name": "3D-e-Chem/knime-silicos-it", - "html_url": "https://github.com/3D-e-Chem/knime-silicos-it", "private": false, "description": "KNIME nodes and example workflows for software made by Silicos-it, ie. align-it, shape-it", "created_at": "2017-04-19T09:52:58Z", diff --git a/database/github/3D-e-Chem/knime-sstea/metadata.json b/database/github/3D-e-Chem/knime-sstea/metadata.json index a6820ec08..1b202a76a 100644 --- a/database/github/3D-e-Chem/knime-sstea/metadata.json +++ b/database/github/3D-e-Chem/knime-sstea/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-sstea", - "url": "https://api.github.com/repos/3D-e-Chem/knime-sstea", + "url": "https://github.com/3D-e-Chem/knime-sstea", "data": { "timestamp": "2020-07-05 00:17:15.362481", "name": "knime-sstea", - "url": "https://api.github.com/repos/3D-e-Chem/knime-sstea", + "url": "https://github.com/3D-e-Chem/knime-sstea", "full_name": "3D-e-Chem/knime-sstea", "html_url": "https://github.com/3D-e-Chem/knime-sstea", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597241", "name": "knime-sstea", "full_name": "3D-e-Chem/knime-sstea", - "html_url": "https://github.com/3D-e-Chem/knime-sstea", "private": false, "description": "Knime node to calculate ss-TEA score of sequence alignment and subfamily members.", "created_at": "2016-05-04T15:08:06Z", diff --git a/database/github/3D-e-Chem/knime-sygma/metadata.json b/database/github/3D-e-Chem/knime-sygma/metadata.json index 1311dfe35..6a5f8075e 100644 --- a/database/github/3D-e-Chem/knime-sygma/metadata.json +++ b/database/github/3D-e-Chem/knime-sygma/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/3D-e-Chem/knime-sygma", - 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"url": "https://api.github.com/repos/NLeSC/PattyVis", + "url": "https://github.com/NLeSC/PattyVis", "data": { "timestamp": "2020-07-05 00:17:18.115161", "name": "PattyVis", - "url": "https://api.github.com/repos/NLeSC/PattyVis", + "url": "https://github.com/NLeSC/PattyVis", "full_name": "NLeSC/PattyVis", "html_url": "https://github.com/NLeSC/PattyVis", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597175", "name": "PattyVis", "full_name": "NLeSC/PattyVis", - "html_url": "https://github.com/NLeSC/PattyVis", "private": false, "description": "Webgl pointcloud visualization of the Via Appia based on potree", "created_at": "2014-08-13T08:17:44Z", diff --git a/database/github/NLeSC/SalientDescriptor-matlab/metadata.json b/database/github/NLeSC/SalientDescriptor-matlab/metadata.json index 8c6979102..a1a1df09d 100644 --- a/database/github/NLeSC/SalientDescriptor-matlab/metadata.json +++ b/database/github/NLeSC/SalientDescriptor-matlab/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/SalientDescriptor-matlab", - "url": "https://api.github.com/repos/NLeSC/SalientDescriptor-matlab", + "url": "https://github.com/NLeSC/SalientDescriptor-matlab", "data": { "timestamp": "2020-07-05 00:17:20.560292", "name": "SalientDescriptor-matlab", - "url": "https://api.github.com/repos/NLeSC/SalientDescriptor-matlab", + "url": "https://github.com/NLeSC/SalientDescriptor-matlab", "full_name": "NLeSC/SalientDescriptor-matlab", "html_url": "https://github.com/NLeSC/SalientDescriptor-matlab", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.831663", "name": "SalientDescriptor-matlab", "full_name": "NLeSC/SalientDescriptor-matlab", - "html_url": "https://github.com/NLeSC/SalientDescriptor-matlab", "private": false, "description": null, "created_at": "2017-07-18T15:41:26Z", diff --git a/database/github/NLeSC/SalientDetector-matlab/metadata.json b/database/github/NLeSC/SalientDetector-matlab/metadata.json index 031c21122..b4a625d34 100644 --- a/database/github/NLeSC/SalientDetector-matlab/metadata.json +++ b/database/github/NLeSC/SalientDetector-matlab/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/SalientDetector-matlab", - "url": "https://api.github.com/repos/NLeSC/SalientDetector-matlab", + "url": "https://github.com/NLeSC/SalientDetector-matlab", "data": { "timestamp": "2020-07-05 00:17:20.718634", "name": "SalientDetector-matlab", - "url": "https://api.github.com/repos/NLeSC/SalientDetector-matlab", + "url": "https://github.com/NLeSC/SalientDetector-matlab", "full_name": "NLeSC/SalientDetector-matlab", "html_url": "https://github.com/NLeSC/SalientDetector-matlab", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1042639", "name": "SalientDetector-matlab", "full_name": "NLeSC/SalientDetector-matlab", - "html_url": "https://github.com/NLeSC/SalientDetector-matlab", "private": false, "description": "MATLAB Software for Large Scale Imaging research @ NLeSc", "created_at": "2016-04-11T15:11:23Z", diff --git a/database/github/NLeSC/SalientDetector-python/metadata.json b/database/github/NLeSC/SalientDetector-python/metadata.json index 146136280..31f361f4a 100644 --- a/database/github/NLeSC/SalientDetector-python/metadata.json +++ b/database/github/NLeSC/SalientDetector-python/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/SalientDetector-python", - "url": "https://api.github.com/repos/NLeSC/SalientDetector-python", + "url": "https://github.com/NLeSC/SalientDetector-python", "data": { "timestamp": "2020-07-05 00:17:20.413235", "name": "SalientDetector-python", - "url": "https://api.github.com/repos/NLeSC/SalientDetector-python", + "url": "https://github.com/NLeSC/SalientDetector-python", "full_name": "NLeSC/SalientDetector-python", "html_url": "https://github.com/NLeSC/SalientDetector-python", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1042643", "name": "SalientDetector-python", "full_name": "NLeSC/SalientDetector-python", - "html_url": "https://github.com/NLeSC/SalientDetector-python", "private": false, "description": "Python package for Large Scale Imaging research @ NLeSC", "created_at": "2016-04-11T15:08:17Z", diff --git a/database/github/NLeSC/ShiCo/metadata.json b/database/github/NLeSC/ShiCo/metadata.json index 40e5c8adb..1406bd103 100644 --- a/database/github/NLeSC/ShiCo/metadata.json +++ b/database/github/NLeSC/ShiCo/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/ShiCo", - "url": "https://api.github.com/repos/NLeSC/ShiCo", + "url": "https://github.com/NLeSC/ShiCo", "data": { "timestamp": "2020-07-05 00:17:21.308467", "name": "ShiCo", - "url": "https://api.github.com/repos/NLeSC/ShiCo", + "url": "https://github.com/NLeSC/ShiCo", "full_name": "NLeSC/ShiCo", "html_url": "https://github.com/NLeSC/ShiCo", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1187089", "name": "ShiCo", "full_name": "NLeSC/ShiCo", - "html_url": "https://github.com/NLeSC/ShiCo", "private": false, "description": "Netherlands eScience Center - Shifting Concepts Through Time project", "created_at": "2015-11-04T09:06:02Z", diff --git a/database/github/NLeSC/UncertaintyVisualization/metadata.json b/database/github/NLeSC/UncertaintyVisualization/metadata.json index f134e2876..2d48e1413 100644 --- a/database/github/NLeSC/UncertaintyVisualization/metadata.json +++ b/database/github/NLeSC/UncertaintyVisualization/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/UncertaintyVisualization", - "url": "https://api.github.com/repos/NLeSC/UncertaintyVisualization", + "url": "https://github.com/NLeSC/UncertaintyVisualization", "data": { "timestamp": "2020-07-05 00:17:21.797713", "name": "UncertaintyVisualization", - "url": "https://api.github.com/repos/NLeSC/UncertaintyVisualization", + "url": "https://github.com/NLeSC/UncertaintyVisualization", "full_name": "NLeSC/UncertaintyVisualization", "html_url": "https://github.com/NLeSC/UncertaintyVisualization", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.996323", "name": "UncertaintyVisualization", "full_name": "NLeSC/UncertaintyVisualization", - "html_url": "https://github.com/NLeSC/UncertaintyVisualization", "private": false, "description": null, "created_at": "2015-07-30T09:06:11Z", diff --git a/database/github/NLeSC/ahn-pointcloud-viewer-ws/metadata.json b/database/github/NLeSC/ahn-pointcloud-viewer-ws/metadata.json index 5aacf9c7d..6c76b47e5 100644 --- a/database/github/NLeSC/ahn-pointcloud-viewer-ws/metadata.json +++ b/database/github/NLeSC/ahn-pointcloud-viewer-ws/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/ahn-pointcloud-viewer-ws", - "url": "https://api.github.com/repos/NLeSC/ahn-pointcloud-viewer-ws", + "url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", "data": { "timestamp": "2020-07-05 00:17:08.189008", "name": "ahn-pointcloud-viewer-ws", - "url": "https://api.github.com/repos/NLeSC/ahn-pointcloud-viewer-ws", + "url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", "full_name": "NLeSC/ahn-pointcloud-viewer-ws", "html_url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.909307", "name": "ahn-pointcloud-viewer-ws", "full_name": "NLeSC/ahn-pointcloud-viewer-ws", - "html_url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", "private": false, "description": "Webservice for ahn pointcloud viewer", "created_at": "2015-06-08T12:58:19Z", diff --git a/database/github/NLeSC/baklava/metadata.json b/database/github/NLeSC/baklava/metadata.json index 7a07c1581..78c73f366 100644 --- a/database/github/NLeSC/baklava/metadata.json +++ b/database/github/NLeSC/baklava/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/baklava", - "url": "https://api.github.com/repos/NLeSC/baklava", + "url": "https://github.com/NLeSC/baklava", "data": { "timestamp": "2020-07-05 00:17:27.341390", "name": "baklava", - "url": "https://api.github.com/repos/NLeSC/baklava", + "url": "https://github.com/NLeSC/baklava", "full_name": "NLeSC/baklava", "html_url": "https://github.com/NLeSC/baklava", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3630355", "name": "baklava", "full_name": "NLeSC/baklava", - "html_url": "https://github.com/NLeSC/baklava", "private": false, "description": "Deploy a Kubernetes cluster and big data services on the cloud.", "created_at": "2019-05-08T09:54:45Z", diff --git a/database/github/NLeSC/boatswain/metadata.json b/database/github/NLeSC/boatswain/metadata.json index 2f43565b1..fd2ff0dd6 100644 --- a/database/github/NLeSC/boatswain/metadata.json +++ b/database/github/NLeSC/boatswain/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/boatswain", - "url": "https://api.github.com/repos/NLeSC/boatswain", + "url": "https://github.com/NLeSC/boatswain", "data": { "timestamp": "2020-07-05 00:17:09.269657", "name": "boatswain", - "url": "https://api.github.com/repos/NLeSC/boatswain", + "url": "https://github.com/NLeSC/boatswain", "full_name": "NLeSC/boatswain", "html_url": "https://github.com/NLeSC/boatswain", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1149010", "name": "boatswain", "full_name": "NLeSC/boatswain", - "html_url": "https://github.com/NLeSC/boatswain", "private": false, "description": "A simple build system for docker images", "created_at": "2017-02-02T12:23:44Z", diff --git a/database/github/NLeSC/case-law-app/metadata.json b/database/github/NLeSC/case-law-app/metadata.json index 647164026..7d051d574 100644 --- a/database/github/NLeSC/case-law-app/metadata.json +++ b/database/github/NLeSC/case-law-app/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/case-law-app", - "url": "https://api.github.com/repos/NLeSC/case-law-app", + "url": "https://github.com/NLeSC/case-law-app", "data": { "timestamp": "2020-07-05 00:17:09.586598", "name": "case-law-app", - "url": "https://api.github.com/repos/NLeSC/case-law-app", + "url": "https://github.com/NLeSC/case-law-app", "full_name": "NLeSC/case-law-app", "html_url": "https://github.com/NLeSC/case-law-app", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.596839", "name": "case-law-app", "full_name": "NLeSC/case-law-app", - "html_url": "https://github.com/NLeSC/case-law-app", "private": false, "description": null, "created_at": "2017-01-18T14:45:03Z", diff --git a/database/github/NLeSC/compressing-the-sky/metadata.json b/database/github/NLeSC/compressing-the-sky/metadata.json index a07871d87..0775cc09d 100644 --- a/database/github/NLeSC/compressing-the-sky/metadata.json +++ b/database/github/NLeSC/compressing-the-sky/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/compressing-the-sky", - "url": "https://api.github.com/repos/NLeSC/compressing-the-sky", + "url": "https://github.com/NLeSC/compressing-the-sky", "data": { "timestamp": "2020-07-05 00:17:10.882362", "name": "compressing-the-sky", - "url": "https://api.github.com/repos/NLeSC/compressing-the-sky", + "url": "https://github.com/NLeSC/compressing-the-sky", "full_name": "NLeSC/compressing-the-sky", "html_url": "https://github.com/NLeSC/compressing-the-sky", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1050368", "name": "compressing-the-sky", "full_name": "NLeSC/compressing-the-sky", - 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"url": "https://api.github.com/repos/NLeSC/docker-couch-admin", + "url": "https://github.com/NLeSC/docker-couch-admin", "data": { "timestamp": "2020-07-05 00:17:11.535657", "name": "docker-couch-admin", - "url": "https://api.github.com/repos/NLeSC/docker-couch-admin", + "url": "https://github.com/NLeSC/docker-couch-admin", "full_name": "NLeSC/docker-couch-admin", "html_url": "https://github.com/NLeSC/docker-couch-admin", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.61301", "name": "docker-couch-admin", "full_name": "NLeSC/docker-couch-admin", - "html_url": "https://github.com/NLeSC/docker-couch-admin", "private": false, "description": "Configures a web service using angular-schema-form and CouchDB", "created_at": "2016-01-07T14:04:01Z", diff --git a/database/github/NLeSC/eAstroViz/metadata.json b/database/github/NLeSC/eAstroViz/metadata.json index 638b4433a..61150d490 100644 --- a/database/github/NLeSC/eAstroViz/metadata.json +++ b/database/github/NLeSC/eAstroViz/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eAstroViz", - "url": "https://api.github.com/repos/NLeSC/eAstroViz", + "url": "https://github.com/NLeSC/eAstroViz", "data": { "timestamp": "2020-07-05 00:17:11.684385", "name": "eAstroViz", - "url": "https://api.github.com/repos/NLeSC/eAstroViz", + "url": "https://github.com/NLeSC/eAstroViz", "full_name": "NLeSC/eAstroViz", "html_url": "https://github.com/NLeSC/eAstroViz", "private": false, @@ -36,7 +36,6 @@ }, "name": "eAstroViz", "full_name": "NLeSC/eAstroViz", - "html_url": "https://github.com/NLeSC/eAstroViz", "private": false, "description": null, "created_at": "2013-03-26T12:16:21Z", diff --git a/database/github/NLeSC/eEcology-Annotation-WS/metadata.json b/database/github/NLeSC/eEcology-Annotation-WS/metadata.json index 3a8c510ff..927897cd4 100644 --- a/database/github/NLeSC/eEcology-Annotation-WS/metadata.json +++ b/database/github/NLeSC/eEcology-Annotation-WS/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eEcology-Annotation-WS", - "url": "https://api.github.com/repos/NLeSC/eEcology-Annotation-WS", + "url": "https://github.com/NLeSC/eEcology-Annotation-WS", "data": { "timestamp": "2020-07-05 00:17:11.843518", "name": "eEcology-Annotation-WS", - "url": "https://api.github.com/repos/NLeSC/eEcology-Annotation-WS", + "url": "https://github.com/NLeSC/eEcology-Annotation-WS", "full_name": "NLeSC/eEcology-Annotation-WS", "html_url": "https://github.com/NLeSC/eEcology-Annotation-WS", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597984", "name": "eEcology-Annotation-WS", "full_name": "NLeSC/eEcology-Annotation-WS", - "html_url": "https://github.com/NLeSC/eEcology-Annotation-WS", "private": false, "description": "Webservice for eEcology Annotation project.", "created_at": "2013-08-28T10:59:18Z", diff --git a/database/github/NLeSC/eEcology-Classification/metadata.json b/database/github/NLeSC/eEcology-Classification/metadata.json index e5013f69c..377435dfa 100644 --- a/database/github/NLeSC/eEcology-Classification/metadata.json +++ b/database/github/NLeSC/eEcology-Classification/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eEcology-Classification", - "url": "https://api.github.com/repos/NLeSC/eEcology-Classification", + "url": "https://github.com/NLeSC/eEcology-Classification", "data": { "timestamp": "2020-07-05 00:17:12.014307", "name": "eEcology-Classification", - "url": "https://api.github.com/repos/NLeSC/eEcology-Classification", + "url": "https://github.com/NLeSC/eEcology-Classification", "full_name": "NLeSC/eEcology-Classification", "html_url": "https://github.com/NLeSC/eEcology-Classification", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.594525", "name": "eEcology-Classification", "full_name": "NLeSC/eEcology-Classification", - "html_url": "https://github.com/NLeSC/eEcology-Classification", "private": false, "description": "Classification tool", "created_at": "2014-01-16T15:21:14Z", diff --git a/database/github/NLeSC/eEcology-SMS-reciever/metadata.json b/database/github/NLeSC/eEcology-SMS-reciever/metadata.json index b21fa7050..d0ab3d22f 100644 --- a/database/github/NLeSC/eEcology-SMS-reciever/metadata.json +++ b/database/github/NLeSC/eEcology-SMS-reciever/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eEcology-SMS-reciever", - "url": "https://api.github.com/repos/NLeSC/eEcology-SMS-reciever", + "url": "https://github.com/NLeSC/eEcology-SMS-reciever", "data": { "timestamp": "2020-07-05 00:17:12.166766", "name": "eEcology-SMS-reciever", - "url": "https://api.github.com/repos/NLeSC/eEcology-SMS-reciever", + "url": "https://github.com/NLeSC/eEcology-SMS-reciever", "full_name": "NLeSC/eEcology-SMS-reciever", "html_url": "https://github.com/NLeSC/eEcology-SMS-reciever", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.598013", "name": "eEcology-SMS-reciever", "full_name": "NLeSC/eEcology-SMS-reciever", - "html_url": "https://github.com/NLeSC/eEcology-SMS-reciever", "private": false, "description": "Webservice to store SMS messages into a database table", "created_at": "2015-02-25T17:01:40Z", diff --git a/database/github/NLeSC/eEcology-script-wrapper/metadata.json b/database/github/NLeSC/eEcology-script-wrapper/metadata.json index 128904f18..3fb9975f5 100644 --- a/database/github/NLeSC/eEcology-script-wrapper/metadata.json +++ b/database/github/NLeSC/eEcology-script-wrapper/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eEcology-script-wrapper", - "url": "https://api.github.com/repos/NLeSC/eEcology-script-wrapper", + "url": "https://github.com/NLeSC/eEcology-script-wrapper", "data": { "timestamp": "2020-07-05 00:17:12.344100", "name": "eEcology-script-wrapper", - "url": "https://api.github.com/repos/NLeSC/eEcology-script-wrapper", + "url": "https://github.com/NLeSC/eEcology-script-wrapper", "full_name": "NLeSC/eEcology-script-wrapper", "html_url": "https://github.com/NLeSC/eEcology-script-wrapper", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1034002", "name": "eEcology-script-wrapper", "full_name": "NLeSC/eEcology-script-wrapper", - "html_url": "https://github.com/NLeSC/eEcology-script-wrapper", "private": false, "description": "Web application to make Matlab, R scripts available.", "created_at": "2013-09-19T14:21:14Z", diff --git a/database/github/NLeSC/eSalsa-MPI/metadata.json b/database/github/NLeSC/eSalsa-MPI/metadata.json index 6fb72acce..e56b0ea38 100644 --- a/database/github/NLeSC/eSalsa-MPI/metadata.json +++ b/database/github/NLeSC/eSalsa-MPI/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/eSalsa-MPI", - "url": "https://api.github.com/repos/NLeSC/eSalsa-MPI", + "url": "https://github.com/NLeSC/eSalsa-MPI", "data": { "timestamp": "2020-07-05 00:17:16.107634", "name": "eSalsa-MPI", - "url": "https://api.github.com/repos/NLeSC/eSalsa-MPI", + "url": "https://github.com/NLeSC/eSalsa-MPI", "full_name": "NLeSC/eSalsa-MPI", "html_url": "https://github.com/NLeSC/eSalsa-MPI", "private": false, @@ -36,7 +36,6 @@ }, "name": "eSalsa-MPI", "full_name": "NLeSC/eSalsa-MPI", - "html_url": "https://github.com/NLeSC/eSalsa-MPI", "private": false, "description": "This project contains the wide area MPI used in the eSalsa project", "created_at": "2013-08-06T14:24:14Z", diff --git a/database/github/nlesc/embodied-emotions-scripts/metadata.json b/database/github/NLeSC/embodied-emotions-scripts/metadata.json similarity index 90% rename from database/github/nlesc/embodied-emotions-scripts/metadata.json rename to database/github/NLeSC/embodied-emotions-scripts/metadata.json index 0b17adaff..20a763f5d 100644 --- a/database/github/nlesc/embodied-emotions-scripts/metadata.json +++ b/database/github/NLeSC/embodied-emotions-scripts/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/nlesc/embodied-emotions-scripts", - "url": "https://api.github.com/repos/NLeSC/embodied-emotions-scripts", + "url": "https://github.com/NLeSC/embodied-emotions-scripts", "data": { "timestamp": "2020-07-05 00:17:12.642187", "name": "embodied-emotions-scripts", - "url": "https://api.github.com/repos/NLeSC/embodied-emotions-scripts", + "url": "https://github.com/NLeSC/embodied-emotions-scripts", "full_name": "NLeSC/embodied-emotions-scripts", "html_url": "https://github.com/NLeSC/embodied-emotions-scripts", "private": false, @@ -36,7 +36,6 @@ }, "name": "embodied-emotions-scripts", "full_name": "NLeSC/embodied-emotions-scripts", - "html_url": "https://github.com/NLeSC/embodied-emotions-scripts", "private": false, "description": null, "created_at": "2015-10-02T08:46:50Z", diff --git a/database/github/NLeSC/esibayes/metadata.json b/database/github/NLeSC/esibayes/metadata.json index 33e89a283..a131601ac 100644 --- a/database/github/NLeSC/esibayes/metadata.json +++ b/database/github/NLeSC/esibayes/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/esibayes", - "url": "https://api.github.com/repos/NLeSC/esibayes", + "url": "https://github.com/NLeSC/esibayes", "data": { "timestamp": "2020-07-05 00:17:16.670022", "name": "esibayes", - "url": "https://api.github.com/repos/NLeSC/esibayes", + "url": "https://github.com/NLeSC/esibayes", "full_name": "NLeSC/esibayes", "html_url": "https://github.com/NLeSC/esibayes", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1064714", "name": "esibayes", "full_name": "NLeSC/esibayes", - "html_url": "https://github.com/NLeSC/esibayes", "private": false, "description": "Optimization and state estimation of dynamic models", "created_at": "2013-05-29T09:55:46Z", diff --git a/database/github/NLeSC/fairdatapoint/metadata.json b/database/github/NLeSC/fairdatapoint/metadata.json index 98f059d24..e8bf6dbfd 100644 --- a/database/github/NLeSC/fairdatapoint/metadata.json +++ b/database/github/NLeSC/fairdatapoint/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/fairdatapoint", - "url": "https://api.github.com/repos/NLeSC/fairdatapoint", + "url": "https://github.com/NLeSC/fairdatapoint", "data": { "timestamp": "2020-07-05 00:17:13.266561", "name": "fairdatapoint", - "url": "https://api.github.com/repos/NLeSC/fairdatapoint", + "url": "https://github.com/NLeSC/fairdatapoint", "full_name": "NLeSC/fairdatapoint", "html_url": "https://github.com/NLeSC/fairdatapoint", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1083950", "name": "fairdatapoint", "full_name": "NLeSC/fairdatapoint", - "html_url": "https://github.com/NLeSC/fairdatapoint", "private": false, "description": "Provide machine-readable descriptions of your data assets", "created_at": "2015-06-15T14:39:10Z", diff --git a/database/github/NLeSC/hadrianus-scripts/metadata.json b/database/github/NLeSC/hadrianus-scripts/metadata.json index 15db2845d..48d3542d6 100644 --- a/database/github/NLeSC/hadrianus-scripts/metadata.json +++ b/database/github/NLeSC/hadrianus-scripts/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/hadrianus-scripts", - "url": "https://api.github.com/repos/NLeSC/hadrianus-scripts", + "url": "https://github.com/NLeSC/hadrianus-scripts", "data": { "timestamp": "2020-07-05 00:17:14.302796", "name": "hadrianus-scripts", - "url": "https://api.github.com/repos/NLeSC/hadrianus-scripts", + "url": "https://github.com/NLeSC/hadrianus-scripts", "full_name": "NLeSC/hadrianus-scripts", "html_url": "https://github.com/NLeSC/hadrianus-scripts", "private": false, @@ -31,7 +31,6 @@ "doi": "10.5281/zenodo.1462264", "name": "hadrianus-scripts", "full_name": "NLeSC/hadrianus-scripts", - "html_url": "https://github.com/NLeSC/hadrianus-scripts", "private": false, "description": "Scripts used for the Hadrianus project", "created_at": "2016-02-09T12:25:08Z", diff --git a/database/github/NLeSC/lokum/metadata.json b/database/github/NLeSC/lokum/metadata.json index eb56d89ed..3166b24a0 100644 --- a/database/github/NLeSC/lokum/metadata.json +++ b/database/github/NLeSC/lokum/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/lokum", - "url": "https://api.github.com/repos/NLeSC/lokum", + "url": "https://github.com/NLeSC/lokum", "data": { "timestamp": "2020-07-05 00:17:27.467253", "name": "lokum", - "url": "https://api.github.com/repos/NLeSC/lokum", + "url": "https://github.com/NLeSC/lokum", "full_name": "NLeSC/lokum", "html_url": "https://github.com/NLeSC/lokum", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3482938", "name": "lokum", "full_name": "NLeSC/lokum", - "html_url": "https://github.com/NLeSC/lokum", "private": false, "description": "Deploy GlusterFS, Docker, Spark and JupyterHub services on bare-metal cluster.", "created_at": "2019-09-11T14:34:08Z", diff --git a/database/github/NLeSC/mcfly/metadata.json b/database/github/NLeSC/mcfly/metadata.json index a86651762..23fedf858 100644 --- a/database/github/NLeSC/mcfly/metadata.json +++ b/database/github/NLeSC/mcfly/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/mcfly", - "url": "https://api.github.com/repos/NLeSC/mcfly", + "url": "https://github.com/NLeSC/mcfly", "data": { "timestamp": "2020-07-05 00:17:16.380304", "name": "mcfly", - "url": "https://api.github.com/repos/NLeSC/mcfly", + "url": "https://github.com/NLeSC/mcfly", "full_name": "NLeSC/mcfly", "html_url": "https://github.com/NLeSC/mcfly", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.596127", "name": "mcfly", "full_name": "NLeSC/mcfly", - "html_url": "https://github.com/NLeSC/mcfly", "private": false, "description": "A deep learning tool for time series classification", "created_at": "2016-05-19T13:09:26Z", diff --git a/database/github/NLeSC/nlesc-serverless-boilerplate/metadata.json b/database/github/NLeSC/nlesc-serverless-boilerplate/metadata.json index eb32335d7..f8a2003ee 100644 --- a/database/github/NLeSC/nlesc-serverless-boilerplate/metadata.json +++ b/database/github/NLeSC/nlesc-serverless-boilerplate/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/nlesc-serverless-boilerplate", - "url": "https://api.github.com/repos/NLeSC/nlesc-serverless-boilerplate", + "url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", "data": { "timestamp": "2020-07-05 00:17:27.782908", "name": "nlesc-serverless-boilerplate", - "url": "https://api.github.com/repos/NLeSC/nlesc-serverless-boilerplate", + "url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", "full_name": "NLeSC/nlesc-serverless-boilerplate", "html_url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3628236", "name": "nlesc-serverless-boilerplate", "full_name": "NLeSC/nlesc-serverless-boilerplate", - "html_url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", "private": false, "description": "An AWS amplify boilerplate web application", "created_at": "2019-12-11T09:45:57Z", diff --git a/database/github/NLeSC/noodles/metadata.json b/database/github/NLeSC/noodles/metadata.json index ba151882b..8ca5616e5 100644 --- a/database/github/NLeSC/noodles/metadata.json +++ b/database/github/NLeSC/noodles/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/noodles", - "url": "https://api.github.com/repos/NLeSC/noodles", + "url": "https://github.com/NLeSC/noodles", "data": { "timestamp": "2020-07-05 00:17:16.942079", "name": "noodles", - "url": "https://api.github.com/repos/NLeSC/noodles", + "url": "https://github.com/NLeSC/noodles", "full_name": "NLeSC/noodles", "html_url": "https://github.com/NLeSC/noodles", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.595714", "name": "noodles", "full_name": "NLeSC/noodles", - "html_url": "https://github.com/NLeSC/noodles", "private": false, "description": "Computational workflow engine, making distributed computing in Python easy!", "created_at": "2015-11-02T11:42:22Z", diff --git a/database/github/NLeSC/pycoeman/metadata.json b/database/github/NLeSC/pycoeman/metadata.json index aa8a832dc..d1f55dc7d 100644 --- a/database/github/NLeSC/pycoeman/metadata.json +++ b/database/github/NLeSC/pycoeman/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/pycoeman", - "url": "https://api.github.com/repos/NLeSC/pycoeman", + "url": "https://github.com/NLeSC/pycoeman", "data": { "timestamp": "2020-07-05 00:17:18.423384", "name": "pycoeman", - "url": "https://api.github.com/repos/NLeSC/pycoeman", + "url": "https://github.com/NLeSC/pycoeman", "full_name": "NLeSC/pycoeman", "html_url": "https://github.com/NLeSC/pycoeman", "private": false, @@ -36,7 +36,6 @@ }, "name": "pycoeman", "full_name": "NLeSC/pycoeman", - "html_url": "https://github.com/NLeSC/pycoeman", "private": false, "description": "Python Commands Execution Manager", "created_at": "2016-07-25T08:29:18Z", diff --git a/database/github/NLeSC/python-pcl/metadata.json b/database/github/NLeSC/python-pcl/metadata.json index bd5db2f50..19ff80730 100644 --- a/database/github/NLeSC/python-pcl/metadata.json +++ b/database/github/NLeSC/python-pcl/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/python-pcl", - "url": "https://api.github.com/repos/NLeSC/python-pcl", + "url": "https://github.com/NLeSC/python-pcl", "data": { "timestamp": "2020-07-05 00:17:18.775231", "name": "python-pcl", - "url": "https://api.github.com/repos/NLeSC/python-pcl", + "url": "https://github.com/NLeSC/python-pcl", "full_name": "NLeSC/python-pcl", "html_url": "https://github.com/NLeSC/python-pcl", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1435460", "name": "python-pcl", "full_name": "NLeSC/python-pcl", - "html_url": "https://github.com/NLeSC/python-pcl", "private": false, "description": "Python bindings to the pointcloud library (pcl)", "created_at": "2015-03-17T13:57:47Z", diff --git a/database/github/NLeSC/python-template/metadata.json b/database/github/NLeSC/python-template/metadata.json index d5597c31c..9d5de6649 100644 --- a/database/github/NLeSC/python-template/metadata.json +++ b/database/github/NLeSC/python-template/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/python-template", - "url": "https://api.github.com/repos/NLeSC/python-template", + "url": "https://github.com/NLeSC/python-template", "data": { "timestamp": "2020-07-05 00:17:23.839872", "name": "python-template", - "url": "https://api.github.com/repos/NLeSC/python-template", + "url": "https://github.com/NLeSC/python-template", "full_name": "NLeSC/python-template", "html_url": "https://github.com/NLeSC/python-template", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1310751", "name": "python-template", "full_name": "NLeSC/python-template", - "html_url": "https://github.com/NLeSC/python-template", "private": false, "description": "Netherlands eScience Center Python Template", "created_at": "2016-09-20T11:18:42Z", diff --git a/database/github/NLeSC/root-conda-recipes/metadata.json b/database/github/NLeSC/root-conda-recipes/metadata.json index 4fe81f72d..0c7a458bb 100644 --- a/database/github/NLeSC/root-conda-recipes/metadata.json +++ b/database/github/NLeSC/root-conda-recipes/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/root-conda-recipes", - "url": "https://api.github.com/repos/NLeSC/root-conda-recipes", + "url": "https://github.com/NLeSC/root-conda-recipes", "data": { "timestamp": "2020-07-05 00:17:20.105248", "name": "root-conda-recipes", - "url": "https://api.github.com/repos/NLeSC/root-conda-recipes", + "url": "https://github.com/NLeSC/root-conda-recipes", "full_name": "NLeSC/root-conda-recipes", "html_url": "https://github.com/NLeSC/root-conda-recipes", "private": false, @@ -31,7 +31,6 @@ "doi": "10.5281/zenodo.47512", "name": "root-conda-recipes", "full_name": "NLeSC/root-conda-recipes", - 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"url": "https://api.github.com/repos/NLeSC/structure-from-motion", + "url": "https://github.com/NLeSC/structure-from-motion", "data": { "timestamp": "2020-07-05 00:17:21.009230", "name": "structure-from-motion", - "url": "https://api.github.com/repos/NLeSC/structure-from-motion", + "url": "https://github.com/NLeSC/structure-from-motion", "full_name": "NLeSC/structure-from-motion", "html_url": "https://github.com/NLeSC/structure-from-motion", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.594751", "name": "structure-from-motion", "full_name": "NLeSC/structure-from-motion", - "html_url": "https://github.com/NLeSC/structure-from-motion", "private": false, "description": "Structure from Motion Pipeline", "created_at": "2015-03-16T13:33:40Z", diff --git a/database/github/NLeSC/xtas/metadata.json b/database/github/NLeSC/xtas/metadata.json index 08ca79d2f..e94f2a942 100644 --- a/database/github/NLeSC/xtas/metadata.json +++ b/database/github/NLeSC/xtas/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/xtas", - 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"url": "https://api.github.com/repos/arabic-digital-humanities/adhtools", + "url": "https://github.com/arabic-digital-humanities/adhtools", "data": { "timestamp": "2020-07-05 00:17:25.968824", "name": "adhtools", - "url": "https://api.github.com/repos/arabic-digital-humanities/adhtools", + "url": "https://github.com/arabic-digital-humanities/adhtools", "full_name": "arabic-digital-humanities/adhtools", "html_url": "https://github.com/arabic-digital-humanities/adhtools", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.2633819", "name": "adhtools", "full_name": "arabic-digital-humanities/adhtools", - "html_url": "https://github.com/arabic-digital-humanities/adhtools", "private": false, "description": "Scripts for manipulating Arabic texts", "created_at": "2018-01-25T09:47:41Z", diff --git a/database/github/arviz-devs/arviz/metadata.json b/database/github/arviz-devs/arviz/metadata.json index 4814b868c..295c4c8dd 100644 --- a/database/github/arviz-devs/arviz/metadata.json +++ b/database/github/arviz-devs/arviz/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/arviz-devs/arviz", - 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"url": "https://api.github.com/repos/biolab/orange-bio", + "url": "https://github.com/biolab/orange-bio", "full_name": "biolab/orange-bio", "html_url": "https://github.com/biolab/orange-bio", "private": false, @@ -37,7 +37,6 @@ "doi": "10.1093/bioinformatics/bth474", "name": "orange-bio", "full_name": "biolab/orange-bio", - "html_url": "https://github.com/biolab/orange-bio", "private": false, "description": null, "created_at": "2015-04-10T08:08:50Z", diff --git a/database/github/biolab/orange3-network/metadata.json b/database/github/biolab/orange3-network/metadata.json index 62b9d5bae..155a62e33 100644 --- a/database/github/biolab/orange3-network/metadata.json +++ b/database/github/biolab/orange3-network/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/biolab/orange3-network", - "url": "https://api.github.com/repos/biolab/orange3-network", + "url": "https://github.com/biolab/orange3-network", "data": { "timestamp": "2020-07-26 00:17:05.647234", "name": "orange3-network", - "url": "https://api.github.com/repos/biolab/orange3-network", + "url": "https://github.com/biolab/orange3-network", "full_name": "biolab/orange3-network", "html_url": "https://github.com/biolab/orange3-network", "private": false, @@ -36,7 +36,6 @@ }, "name": "orange3-network", "full_name": "biolab/orange3-network", - "html_url": "https://github.com/biolab/orange3-network", "private": false, "description": "\ud83c\udf4a \ud83d\udd78 Network analysis add-on for Orange data mining suite.", "created_at": "2015-08-14T12:29:15Z", diff --git a/database/github/biolab/orange3/metadata.json b/database/github/biolab/orange3/metadata.json index 5ff5a4c8c..2c0f1dedb 100644 --- a/database/github/biolab/orange3/metadata.json +++ b/database/github/biolab/orange3/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/biolab/orange3", - "url": "https://api.github.com/repos/biolab/orange3", + "url": "https://github.com/biolab/orange3", "data": { "timestamp": "2020-07-04 13:22:32.400067", "name": "orange3", - "url": "https://api.github.com/repos/biolab/orange3", + "url": "https://github.com/biolab/orange3", "full_name": "biolab/orange3", "html_url": "https://github.com/biolab/orange3", "private": false, @@ -36,7 +36,6 @@ }, "name": "orange3", "full_name": "biolab/orange3", - "html_url": "https://github.com/biolab/orange3", "private": false, "description": "\ud83c\udf4a :bar_chart: :bulb: Orange: Interactive data analysis https://orange.biolab.si", "created_at": "2013-02-22T12:52:56Z", diff --git a/database/github/reproducible-biomedical-modeling/Biosimulations/metadata.json b/database/github/biosimulations/Biosimulations/Biosimulations/metadata.json similarity index 100% rename from database/github/reproducible-biomedical-modeling/Biosimulations/metadata.json rename to database/github/biosimulations/Biosimulations/Biosimulations/metadata.json diff --git a/database/github/kkjawz/coref-ee/metadata.json b/database/github/bkntr/coref-ee/metadata.json similarity index 92% rename from database/github/kkjawz/coref-ee/metadata.json rename to database/github/bkntr/coref-ee/metadata.json index cb7477b40..3f1cf5213 100644 --- a/database/github/kkjawz/coref-ee/metadata.json +++ b/database/github/bkntr/coref-ee/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/kkjawz/coref-ee", - "url": "https://api.github.com/repos/kkjawz/coref-ee", + "url": "https://github.com/bkntr/coref-ee", "data": { "timestamp": "2020-07-05 00:17:53.848767", "name": "coref-ee", - "url": "https://api.github.com/repos/kkjawz/coref-ee", + "url": "https://github.com/bkntr/coref-ee", "full_name": "kkjawz/coref-ee", "html_url": "https://github.com/kkjawz/coref-ee", "private": false, @@ -36,7 +36,6 @@ }, "name": "coref-ee", "full_name": "kkjawz/coref-ee", - "html_url": "https://github.com/kkjawz/coref-ee", "private": false, "description": "Coreference Resolution With Entity Equalization", "created_at": "2019-06-03T08:11:48Z", diff --git a/database/github/bokeh/bokeh/metadata.json b/database/github/bokeh/bokeh/metadata.json index a3198c1e3..cf8cce13e 100644 --- a/database/github/bokeh/bokeh/metadata.json +++ b/database/github/bokeh/bokeh/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/bokeh/bokeh", - "url": "https://api.github.com/repos/bokeh/bokeh", + "url": "https://github.com/bokeh/bokeh", "data": { "timestamp": "2020-07-04 13:22:12.458971", "name": "bokeh", - "url": "https://api.github.com/repos/bokeh/bokeh", + "url": "https://github.com/bokeh/bokeh", "full_name": "bokeh/bokeh", "html_url": "https://github.com/bokeh/bokeh", "private": false, @@ -36,7 +36,6 @@ }, "name": "bokeh", "full_name": "bokeh/bokeh", - "html_url": "https://github.com/bokeh/bokeh", "private": false, "description": "Interactive Data Visualization in the browser, from Python", "created_at": "2012-03-26T15:40:01Z", diff --git a/database/github/bpp/bpp/metadata.json b/database/github/bpp/bpp/metadata.json index 220bb5960..12c1bb361 100644 --- a/database/github/bpp/bpp/metadata.json +++ b/database/github/bpp/bpp/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/bpp/bpp", - "url": null, + "url": "https://github.com/bpp/bpp", "data": { "title": "bpp", "url": "https://github.com/bpp/bpp", diff --git a/database/github/brentp/cyvcf2/metadata.json b/database/github/brentp/cyvcf2/metadata.json index e3f4221a3..89492843b 100644 --- a/database/github/brentp/cyvcf2/metadata.json +++ b/database/github/brentp/cyvcf2/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/brentp/cyvcf2", - "url": null, + "url": "https://github.com/brentp/cyvcf2", "data": { "title": "cyvcf2", "url": "https://github.com/brentp/cyvcf2", diff --git a/database/github/bretthandrews/flexCE/metadata.json b/database/github/bretthandrews/flexce/metadata.json similarity index 100% rename from database/github/bretthandrews/flexCE/metadata.json rename to database/github/bretthandrews/flexce/metadata.json diff --git a/database/github/broadinstitute/CellBender/metadata.json b/database/github/broadinstitute/CellBender/metadata.json index 1a48e7600..9d7612786 100644 --- a/database/github/broadinstitute/CellBender/metadata.json +++ b/database/github/broadinstitute/CellBender/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/broadinstitute/CellBender", - "url": null, + "url": "https://github.com/broadinstitute/CellBender", "data": { "title": "CellBender", "url": "https://github.com/broadinstitute/CellBender", diff --git a/database/github/broadinstitute/cromwell/metadata.json b/database/github/broadinstitute/cromwell/metadata.json index a4be02527..adebf1d36 100644 --- a/database/github/broadinstitute/cromwell/metadata.json +++ b/database/github/broadinstitute/cromwell/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/broadinstitute/cromwell", - "url": "https://api.github.com/repos/broadinstitute/cromwell", + "url": "https://github.com/broadinstitute/cromwell", "data": { "timestamp": "2020-07-04 13:22:41.059112", "name": "cromwell", - "url": "https://api.github.com/repos/broadinstitute/cromwell", + "url": "https://github.com/broadinstitute/cromwell", "full_name": "broadinstitute/cromwell", "html_url": "https://github.com/broadinstitute/cromwell", "private": false, @@ -36,7 +36,6 @@ }, "name": "cromwell", "full_name": "broadinstitute/cromwell", - "html_url": "https://github.com/broadinstitute/cromwell", "private": false, "description": "Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments", "created_at": "2015-04-17T19:39:36Z", diff --git a/database/github/pilon/wiki/metadata.json b/database/github/broadinstitute/pilon/metadata.json similarity index 73% rename from database/github/pilon/wiki/metadata.json rename to database/github/broadinstitute/pilon/metadata.json index 380b7c2e5..f93adec48 100644 --- a/database/github/pilon/wiki/metadata.json +++ b/database/github/broadinstitute/pilon/metadata.json @@ -1,10 +1,10 @@ { "parser": "github", - "uid": "github/pilon/wiki", - "url": null, + "uid": "github/broadinstitute/pilon", + "url": "https://github.com/broadinstitute/pilon", "data": { "title": "Pilon", - "url": "https://github.com/broadinstitute/pilon/wiki", + "url": "https://github.com/broadinstitute/pilon", "credit": [], "tags": [ "genome-assembly", @@ -13,4 +13,4 @@ "description": "Pilon is a software tool which can be used to automatically improve draft assemblies and find variation among strains, including large event detection.", "timestamp": "2022-07-18 17:46:22.067066" } -} \ No newline at end of file +} diff --git a/database/github/bwengals/CCSNMultivar/metadata.json b/database/github/bwengals/ccsnmultivar/metadata.json similarity index 100% rename from database/github/bwengals/CCSNMultivar/metadata.json rename to database/github/bwengals/ccsnmultivar/metadata.json diff --git a/database/github/bxia888/CEFCIG/metadata.json b/database/github/bxia888/CEFCIG/metadata.json index a1f1ff294..9c5fbc840 100644 --- a/database/github/bxia888/CEFCIG/metadata.json +++ b/database/github/bxia888/CEFCIG/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/bxia888/CEFCIG", - "url": null, + "url": "https://github.com/bxia888/CEFCIG", "data": { "title": "CEFCIG", "url": "https://github.com/bxia888/CEFCIG", diff --git a/database/github/c-martinez/BeyondTheBook/metadata.json b/database/github/c-martinez/BeyondTheBook/metadata.json index ff7a3eb52..c8056304d 100644 --- a/database/github/c-martinez/BeyondTheBook/metadata.json +++ b/database/github/c-martinez/BeyondTheBook/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/c-martinez/BeyondTheBook", - "url": "https://api.github.com/repos/c-martinez/BeyondTheBook", + "url": "https://github.com/c-martinez/BeyondTheBook", "data": { "timestamp": "2020-07-05 00:17:09.143818", "name": "BeyondTheBook", - "url": "https://api.github.com/repos/c-martinez/BeyondTheBook", + "url": "https://github.com/c-martinez/BeyondTheBook", "full_name": "c-martinez/BeyondTheBook", "html_url": "https://github.com/c-martinez/BeyondTheBook", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1436372", "name": "BeyondTheBook", "full_name": "c-martinez/BeyondTheBook", - "html_url": "https://github.com/c-martinez/BeyondTheBook", "private": false, "description": "Using Wikipedia to assess the translatability of text.", "created_at": "2014-08-14T11:30:21Z", diff --git a/database/github/c3s-magic/c3s-magic-wps/metadata.json b/database/github/c3s-magic/c3s-magic-wps/metadata.json index 8735b4f54..5c1f19d08 100644 --- a/database/github/c3s-magic/c3s-magic-wps/metadata.json +++ b/database/github/c3s-magic/c3s-magic-wps/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/c3s-magic/c3s-magic-wps", - "url": "https://api.github.com/repos/c3s-magic/c3s-magic-wps", + "url": "https://github.com/c3s-magic/c3s-magic-wps", "data": { "timestamp": "2020-07-05 00:17:26.616981", "name": "c3s-magic-wps", - "url": "https://api.github.com/repos/c3s-magic/c3s-magic-wps", + "url": "https://github.com/c3s-magic/c3s-magic-wps", "full_name": "c3s-magic/c3s-magic-wps", "html_url": "https://github.com/c3s-magic/c3s-magic-wps", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3240041", "name": "c3s-magic-wps", "full_name": "c3s-magic/c3s-magic-wps", - "html_url": "https://github.com/c3s-magic/c3s-magic-wps", "private": false, "description": null, "created_at": "2019-04-30T12:02:23Z", diff --git a/database/github/calboo/wigglewave/metadata.json b/database/github/calboo/Wigglewave/metadata.json similarity index 100% rename from database/github/calboo/wigglewave/metadata.json rename to database/github/calboo/Wigglewave/metadata.json diff --git a/database/github/cameronliang/BayesVP/metadata.json b/database/github/cameronliang/bayesvp/metadata.json similarity index 100% rename from database/github/cameronliang/BayesVP/metadata.json rename to database/github/cameronliang/bayesvp/metadata.json diff --git a/database/github/candYgene/QTM/metadata.json b/database/github/candYgene/QTM/metadata.json index f761839ef..e272efe52 100644 --- a/database/github/candYgene/QTM/metadata.json +++ b/database/github/candYgene/QTM/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/candYgene/QTM", - "url": "https://api.github.com/repos/candYgene/QTM", + "url": "https://github.com/candYgene/QTM", "data": { "timestamp": "2020-07-05 00:17:19.302552", "name": "QTM", - "url": "https://api.github.com/repos/candYgene/QTM", + "url": "https://github.com/candYgene/QTM", "full_name": "candYgene/QTM", "html_url": "https://github.com/candYgene/QTM", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1193639", "name": "QTM", "full_name": "candYgene/QTM", - "html_url": "https://github.com/candYgene/QTM", "private": false, "description": "QTLTableMiner++ tool for mining tables in scientific articles", "created_at": "2019-08-28T09:17:12Z", diff --git a/database/github/candYgene/abg-ld/metadata.json b/database/github/candYgene/abg-ld/metadata.json index b765cb32f..80d122b13 100644 --- a/database/github/candYgene/abg-ld/metadata.json +++ b/database/github/candYgene/abg-ld/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/candYgene/abg-ld", - "url": "https://api.github.com/repos/candYgene/abg-ld", + "url": "https://github.com/candYgene/abg-ld", "data": { "timestamp": "2020-07-05 00:17:15.667804", "name": "abg-ld", - "url": "https://api.github.com/repos/candYgene/abg-ld", + "url": "https://github.com/candYgene/abg-ld", "full_name": "candYgene/abg-ld", "html_url": "https://github.com/candYgene/abg-ld", "private": false, @@ -36,7 +36,6 @@ }, "name": "abg-ld", "full_name": "candYgene/abg-ld", - "html_url": "https://github.com/candYgene/abg-ld", "private": false, "description": "Linked Data Platform for Animal Breeding & Genomics", "created_at": "2017-04-10T21:04:46Z", diff --git a/database/github/candYgene/pbg-ld/metadata.json b/database/github/candYgene/pbg-ld/metadata.json index 87ad216ea..39743e7d5 100644 --- a/database/github/candYgene/pbg-ld/metadata.json +++ b/database/github/candYgene/pbg-ld/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/candYgene/pbg-ld", - "url": "https://api.github.com/repos/candYgene/pbg-ld", + "url": "https://github.com/candYgene/pbg-ld", "data": { "timestamp": "2020-07-05 00:17:15.801817", "name": "pbg-ld", - "url": "https://api.github.com/repos/candYgene/pbg-ld", + "url": "https://github.com/candYgene/pbg-ld", "full_name": "candYgene/pbg-ld", "html_url": "https://github.com/candYgene/pbg-ld", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1458168", "name": "pbg-ld", "full_name": "candYgene/pbg-ld", - "html_url": "https://github.com/candYgene/pbg-ld", "private": false, "description": "Linked Data Platform for Plant Breeding & Genomics", "created_at": "2017-04-10T21:00:27Z", diff --git a/database/github/candYgene/siga/metadata.json b/database/github/candYgene/siga/metadata.json index 2e5cbfdd1..8d402998f 100644 --- a/database/github/candYgene/siga/metadata.json +++ b/database/github/candYgene/siga/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/candYgene/siga", - "url": "https://api.github.com/repos/candYgene/siga", + "url": "https://github.com/candYgene/siga", "data": { "timestamp": "2020-07-05 00:17:21.483907", "name": "siga", - "url": "https://api.github.com/repos/candYgene/siga", + "url": "https://github.com/candYgene/siga", "full_name": "candYgene/siga", "html_url": "https://github.com/candYgene/siga", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1076437", "name": "siga", "full_name": "candYgene/siga", - "html_url": "https://github.com/candYgene/siga", "private": false, "description": "Semantically Interoperable Genome Annotations", "created_at": "2017-04-10T22:10:29Z", diff --git a/database/github/caselawanalytics/CaseLawAnalytics/metadata.json b/database/github/caselawanalytics/CaseLawAnalytics/metadata.json index c2d9ac1b0..09e431d71 100644 --- a/database/github/caselawanalytics/CaseLawAnalytics/metadata.json +++ b/database/github/caselawanalytics/CaseLawAnalytics/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/caselawanalytics/CaseLawAnalytics", - "url": "https://api.github.com/repos/caselawanalytics/CaseLawAnalytics", + "url": "https://github.com/caselawanalytics/CaseLawAnalytics", "data": { "timestamp": "2020-07-05 00:17:09.733202", "name": "CaseLawAnalytics", - "url": "https://api.github.com/repos/caselawanalytics/CaseLawAnalytics", + "url": "https://github.com/caselawanalytics/CaseLawAnalytics", "full_name": "caselawanalytics/CaseLawAnalytics", "html_url": "https://github.com/caselawanalytics/CaseLawAnalytics", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.832894", "name": "CaseLawAnalytics", "full_name": "caselawanalytics/CaseLawAnalytics", - "html_url": "https://github.com/caselawanalytics/CaseLawAnalytics", "private": false, "description": null, "created_at": "2016-10-11T12:16:05Z", diff --git a/database/github/cb-geo/mpm/metadata.json b/database/github/cb-geo/mpm/metadata.json index bdd3d1e87..5a06b43d2 100644 --- a/database/github/cb-geo/mpm/metadata.json +++ b/database/github/cb-geo/mpm/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/cb-geo/mpm", - "url": "https://api.github.com/repos/cb-geo/mpm", + "url": "https://github.com/cb-geo/mpm", "data": { "timestamp": "2020-07-04 13:22:12.955367", "name": "mpm", - "url": "https://api.github.com/repos/cb-geo/mpm", + "url": "https://github.com/cb-geo/mpm", "full_name": "cb-geo/mpm", "html_url": "https://github.com/cb-geo/mpm", "private": false, @@ -36,7 +36,6 @@ }, "name": "mpm", "full_name": "cb-geo/mpm", - "html_url": "https://github.com/cb-geo/mpm", "private": false, "description": "CB-Geo High-Performance Material Point Method", "created_at": "2017-08-25T23:53:55Z", diff --git a/database/github/cbalbin-FIU/Epitopedia/metadata.json b/database/github/cbalbin-bio/Epitopedia/metadata.json similarity index 100% rename from database/github/cbalbin-FIU/Epitopedia/metadata.json rename to database/github/cbalbin-bio/Epitopedia/metadata.json diff --git a/database/github/cbirdferrer/collatrix/metadata.json b/database/github/cbirdferrer/collatrix/metadata.json index cf471d63b..44e19748e 100644 --- a/database/github/cbirdferrer/collatrix/metadata.json +++ b/database/github/cbirdferrer/collatrix/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/cbirdferrer/collatrix", - "url": "https://api.github.com/repos/cbirdferrer/collatrix", + "url": "https://github.com/cbirdferrer/collatrix", "data": { "timestamp": "2020-07-12 00:26:30.009788", "name": "collatrix", - "url": "https://api.github.com/repos/cbirdferrer/collatrix", + "url": "https://github.com/cbirdferrer/collatrix", "full_name": "cbirdferrer/collatrix", "html_url": "https://github.com/cbirdferrer/collatrix", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.5281/zenodo.3937611", "name": "collatrix", "full_name": "cbirdferrer/collatrix", - "html_url": "https://github.com/cbirdferrer/collatrix", "private": false, "description": "this tool collates the outputs of the MorphoMetriX photogrammetry tool", "created_at": "2020-02-26T23:10:26Z", diff --git a/database/github/cbrueffer/tophat-recondition/metadata.json b/database/github/cbrueffer/tophat-recondition/metadata.json index 45a2cfa68..0a6286734 100644 --- a/database/github/cbrueffer/tophat-recondition/metadata.json +++ b/database/github/cbrueffer/tophat-recondition/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/cbrueffer/tophat-recondition", - "url": "https://api.github.com/repos/cbrueffer/tophat-recondition", + "url": "https://github.com/cbrueffer/tophat-recondition", "data": { "timestamp": "2020-07-19 00:17:19.935707", "name": "tophat-recondition", - "url": "https://api.github.com/repos/cbrueffer/tophat-recondition", + "url": "https://github.com/cbrueffer/tophat-recondition", "full_name": "cbrueffer/tophat-recondition", "html_url": "https://github.com/cbrueffer/tophat-recondition", "private": false, @@ -37,7 +37,6 @@ "doi": "10.1186/s12859-016-1058-x", "name": "tophat-recondition", "full_name": "cbrueffer/tophat-recondition", - "html_url": "https://github.com/cbrueffer/tophat-recondition", "private": false, "description": "Post-processor for TopHat unmapped.bam files making them useable by downstream software.", "created_at": "2014-10-29T14:12:58Z", diff --git a/database/github/chanzuckerberg/cellxgene/metadata.json b/database/github/chanzuckerberg/cellxgene/metadata.json index 5a03a39a9..c7453b5bb 100644 --- a/database/github/chanzuckerberg/cellxgene/metadata.json +++ b/database/github/chanzuckerberg/cellxgene/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/chanzuckerberg/cellxgene", - "url": null, + "url": "https://github.com/chanzuckerberg/cellxgene", "data": { "title": "cellxgene", "url": "https://github.com/chanzuckerberg/cellxgene", diff --git a/database/github/chanzuckerberg/idseq-dag/metadata.json b/database/github/chanzuckerberg/czid-dag/metadata.json similarity index 100% rename from database/github/chanzuckerberg/idseq-dag/metadata.json rename to database/github/chanzuckerberg/czid-dag/metadata.json diff --git a/database/github/christopher-vollmers/C3POa/metadata.json b/database/github/christopher-vollmers/C3POa/metadata.json index 5fa8e052d..1f4df42c7 100644 --- a/database/github/christopher-vollmers/C3POa/metadata.json +++ b/database/github/christopher-vollmers/C3POa/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/christopher-vollmers/C3POa", - "url": null, + "url": "https://github.com/christopher-vollmers/C3POa", "data": { "title": "C3POa", "url": "https://github.com/christopher-vollmers/C3POa", diff --git a/database/github/christophuv/PeakBot_example/metadata.json b/database/github/christophuv/PeakBot_Example/metadata.json similarity index 100% rename from database/github/christophuv/PeakBot_example/metadata.json rename to database/github/christophuv/PeakBot_Example/metadata.json diff --git a/database/github/ci-for-research/self-hosted-runners/metadata.json b/database/github/ci-for-research/self-hosted-runners/metadata.json index 6fe0ba101..d4495d019 100644 --- a/database/github/ci-for-research/self-hosted-runners/metadata.json +++ b/database/github/ci-for-research/self-hosted-runners/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/ci-for-science/self-hosted-runners", - "url": "https://api.github.com/repos/ci-for-research/self-hosted-runners", + "url": "https://github.com/ci-for-research/self-hosted-runners", "data": { "timestamp": "2020-07-05 00:17:29.666854", "name": "self-hosted-runners", - "url": "https://api.github.com/repos/ci-for-research/self-hosted-runners", + "url": "https://github.com/ci-for-research/self-hosted-runners", "full_name": "ci-for-research/self-hosted-runners", "html_url": "https://github.com/ci-for-research/self-hosted-runners", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3904265", "name": "self-hosted-runners", "full_name": "ci-for-research/self-hosted-runners", - "html_url": "https://github.com/ci-for-research/self-hosted-runners", "private": false, "description": "Recipe to install and configure a GitHub action runner using Ansible", "created_at": "2019-11-26T14:03:16Z", diff --git a/database/github/ci-for-science/self-hosted-runners/metadata.json b/database/github/ci-for-research/self-hosted-runners/self-hosted-runners/metadata.json similarity index 100% rename from database/github/ci-for-science/self-hosted-runners/metadata.json rename to database/github/ci-for-research/self-hosted-runners/self-hosted-runners/metadata.json diff --git a/database/github/citation-file-format/cff-converter-python/metadata.json b/database/github/citation-file-format/cff-converter-python/metadata.json index fc1a809f8..6f1c00c48 100644 --- a/database/github/citation-file-format/cff-converter-python/metadata.json +++ b/database/github/citation-file-format/cff-converter-python/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/citation-file-format/cff-converter-python", - "url": "https://api.github.com/repos/citation-file-format/cff-converter-python", + "url": "https://github.com/citation-file-format/cff-converter-python", "data": { "timestamp": "2020-07-05 00:17:10.447070", "name": "cff-converter-python", - "url": "https://api.github.com/repos/citation-file-format/cff-converter-python", + "url": "https://github.com/citation-file-format/cff-converter-python", "full_name": "citation-file-format/cff-converter-python", "html_url": "https://github.com/citation-file-format/cff-converter-python", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1162057", "name": "cff-converter-python", "full_name": "citation-file-format/cff-converter-python", - "html_url": "https://github.com/citation-file-format/cff-converter-python", "private": false, "description": "Command line utility to read CITATION.cff file from a GitHub url or local file and convert it to BibTex and other formats.", "created_at": "2018-01-09T14:16:28Z", diff --git a/database/github/citation-file-format/cff-initializer-javascript/metadata.json b/database/github/citation-file-format/cff-initializer-javascript/metadata.json index 20fb9428f..5795cecfd 100644 --- a/database/github/citation-file-format/cff-initializer-javascript/metadata.json +++ b/database/github/citation-file-format/cff-initializer-javascript/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/citation-file-format/cff-initializer-javascript", - "url": "https://api.github.com/repos/citation-file-format/cff-initializer-javascript", + "url": "https://github.com/citation-file-format/cff-initializer-javascript", "data": { "timestamp": "2020-07-05 00:17:24.043016", "name": "cff-initializer-javascript", - "url": "https://api.github.com/repos/citation-file-format/cff-initializer-javascript", + "url": "https://github.com/citation-file-format/cff-initializer-javascript", "full_name": "citation-file-format/cff-initializer-javascript", "html_url": "https://github.com/citation-file-format/cff-initializer-javascript", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1404735", "name": "cff-initializer-javascript", "full_name": "citation-file-format/cff-initializer-javascript", - "html_url": "https://github.com/citation-file-format/cff-initializer-javascript", "private": false, "description": "Web form to initialize CITATION.cff files.", "created_at": "2018-08-02T13:14:06Z", diff --git a/database/github/clawpack/clawpack/metadata.json b/database/github/clawpack/clawpack/metadata.json index c90400cc2..1b886f20d 100644 --- a/database/github/clawpack/clawpack/metadata.json +++ b/database/github/clawpack/clawpack/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/clawpack/clawpack", - "url": "https://api.github.com/repos/clawpack/clawpack", + "url": "https://github.com/clawpack/clawpack", "data": { "timestamp": "2020-07-04 13:22:17.891009", "name": "clawpack", - "url": "https://api.github.com/repos/clawpack/clawpack", + "url": "https://github.com/clawpack/clawpack", "full_name": "clawpack/clawpack", "html_url": "https://github.com/clawpack/clawpack", "private": false, @@ -36,7 +36,6 @@ }, "name": "clawpack", "full_name": "clawpack/clawpack", - "html_url": "https://github.com/clawpack/clawpack", "private": false, "description": "Package for solving hyperbolic systems of partial differential equations", "created_at": "2012-04-19T12:32:03Z", diff --git a/database/github/clawpack/pyclaw/metadata.json b/database/github/clawpack/pyclaw/metadata.json index b7d81031a..a83bc9bd8 100644 --- a/database/github/clawpack/pyclaw/metadata.json +++ b/database/github/clawpack/pyclaw/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/clawpack/pyclaw", - "url": "https://api.github.com/repos/clawpack/pyclaw", + "url": "https://github.com/clawpack/pyclaw", "data": { "timestamp": "2020-07-04 13:22:18.413432", "name": "pyclaw", - "url": "https://api.github.com/repos/clawpack/pyclaw", + "url": "https://github.com/clawpack/pyclaw", "full_name": "clawpack/pyclaw", "html_url": "https://github.com/clawpack/pyclaw", "private": false, @@ -36,7 +36,6 @@ }, "name": "pyclaw", "full_name": "clawpack/pyclaw", - "html_url": "https://github.com/clawpack/pyclaw", "private": false, "description": "PyClaw is a Python-based interface to the algorithms of Clawpack and SharpClaw. 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"url": "https://api.github.com/repos/conda-forge/conda-smithy", + "url": "https://github.com/conda-forge/conda-smithy", "data": { "timestamp": "2020-07-04 13:22:41.985602", "name": "conda-smithy", - "url": "https://api.github.com/repos/conda-forge/conda-smithy", + "url": "https://github.com/conda-forge/conda-smithy", "full_name": "conda-forge/conda-smithy", "html_url": "https://github.com/conda-forge/conda-smithy", "private": false, @@ -36,7 +36,6 @@ }, "name": "conda-smithy", "full_name": "conda-forge/conda-smithy", - "html_url": "https://github.com/conda-forge/conda-smithy", "private": false, "description": "The tool for managing conda-forge feedstocks.", "created_at": "2015-04-11T07:38:36Z", diff --git a/database/github/conda/conda/metadata.json b/database/github/conda/conda/metadata.json index 3abadaec4..c1c232b18 100644 --- a/database/github/conda/conda/metadata.json +++ b/database/github/conda/conda/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/conda/conda", - 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"url": "https://api.github.com/repos/eWaterCycle/experiment-launcher", + "url": "https://github.com/eWaterCycle/experiment-launcher", "data": { "timestamp": "2020-07-05 00:17:24.649613", "name": "experiment-launcher", - "url": "https://api.github.com/repos/eWaterCycle/experiment-launcher", + "url": "https://github.com/eWaterCycle/experiment-launcher", "full_name": "eWaterCycle/experiment-launcher", "html_url": "https://github.com/eWaterCycle/experiment-launcher", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1453264", "name": "experiment-launcher", "full_name": "eWaterCycle/experiment-launcher", - "html_url": "https://github.com/eWaterCycle/experiment-launcher", "private": false, "description": "eWaterCycle Experiment Launcher", "created_at": "2018-04-03T11:05:19Z", diff --git a/database/github/eWaterCycle/grpc4bmi/metadata.json b/database/github/eWaterCycle/grpc4bmi/metadata.json index db215f257..b7e523e2f 100644 --- a/database/github/eWaterCycle/grpc4bmi/metadata.json +++ b/database/github/eWaterCycle/grpc4bmi/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/eWaterCycle/grpc4bmi", - "url": "https://api.github.com/repos/eWaterCycle/grpc4bmi", + "url": "https://github.com/eWaterCycle/grpc4bmi", "data": { "timestamp": "2020-07-05 00:17:26.891489", "name": "grpc4bmi", - "url": "https://api.github.com/repos/eWaterCycle/grpc4bmi", + "url": "https://github.com/eWaterCycle/grpc4bmi", "full_name": "eWaterCycle/grpc4bmi", "html_url": "https://github.com/eWaterCycle/grpc4bmi", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1462641", "name": "grpc4bmi", "full_name": "eWaterCycle/grpc4bmi", - "html_url": "https://github.com/eWaterCycle/grpc4bmi", "private": false, "description": "gRPC wrapper for model with a Basic modeling interface", "created_at": "2018-04-19T15:34:36Z", diff --git a/database/github/eWaterCycle/jupyterlab_thredds/metadata.json b/database/github/eWaterCycle/jupyterlab_thredds/metadata.json index 8340fc6ed..93fe856c3 100644 --- a/database/github/eWaterCycle/jupyterlab_thredds/metadata.json +++ b/database/github/eWaterCycle/jupyterlab_thredds/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/eWaterCycle/jupyterlab_thredds", - "url": "https://api.github.com/repos/eWaterCycle/jupyterlab_thredds", + "url": "https://github.com/eWaterCycle/jupyterlab_thredds", "data": { "timestamp": "2020-07-05 00:17:24.523294", "name": "jupyterlab_thredds", - "url": "https://api.github.com/repos/eWaterCycle/jupyterlab_thredds", + "url": "https://github.com/eWaterCycle/jupyterlab_thredds", "full_name": "eWaterCycle/jupyterlab_thredds", "html_url": "https://github.com/eWaterCycle/jupyterlab_thredds", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1241006", "name": "jupyterlab_thredds", "full_name": "eWaterCycle/jupyterlab_thredds", - "html_url": "https://github.com/eWaterCycle/jupyterlab_thredds", "private": false, "description": "JupyterLab dataset browser for THREDDS catalog", "created_at": "2018-04-10T15:43:36Z", diff --git a/database/github/eWaterCycle/setup-grpc/metadata.json b/database/github/eWaterCycle/setup-grpc/metadata.json index 1a57d402a..4bebf4e06 100644 --- a/database/github/eWaterCycle/setup-grpc/metadata.json +++ b/database/github/eWaterCycle/setup-grpc/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/eWaterCycle/setup-grpc", - "url": "https://api.github.com/repos/eWaterCycle/setup-grpc", + "url": "https://github.com/eWaterCycle/setup-grpc", "data": { "timestamp": "2020-08-02 16:35:24.409366", "name": "setup-grpc", - "url": "https://api.github.com/repos/eWaterCycle/setup-grpc", + "url": "https://github.com/eWaterCycle/setup-grpc", "full_name": "eWaterCycle/setup-grpc", "html_url": "https://github.com/eWaterCycle/setup-grpc", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3964180", "name": "setup-grpc", "full_name": "eWaterCycle/setup-grpc", - "html_url": "https://github.com/eWaterCycle/setup-grpc", "private": false, "description": "GitHub Action to setup gRPC C++ environment", "created_at": "2020-07-28T16:29:38Z", diff --git a/database/github/eWaterCycle/setup-singularity/metadata.json b/database/github/eWaterCycle/setup-singularity/metadata.json index 9fbf6a155..0946a500b 100644 --- a/database/github/eWaterCycle/setup-singularity/metadata.json +++ b/database/github/eWaterCycle/setup-singularity/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/eWaterCycle/setup-singularity", - "url": "https://api.github.com/repos/eWaterCycle/setup-singularity", + "url": "https://github.com/eWaterCycle/setup-singularity", "data": { "timestamp": "2020-08-02 16:35:24.247632", "name": "setup-singularity", - "url": "https://api.github.com/repos/eWaterCycle/setup-singularity", + "url": "https://github.com/eWaterCycle/setup-singularity", "full_name": "eWaterCycle/setup-singularity", "html_url": "https://github.com/eWaterCycle/setup-singularity", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3964180", "name": "setup-singularity", "full_name": "eWaterCycle/setup-singularity", - "html_url": "https://github.com/eWaterCycle/setup-singularity", "private": false, "description": "GitHub action to setup singularity", "created_at": "2020-07-28T09:23:04Z", diff --git a/database/github/easystats/correlation/metadata.json b/database/github/easystats/correlation/metadata.json index 3cd8c3b45..82284f176 100644 --- a/database/github/easystats/correlation/metadata.json +++ b/database/github/easystats/correlation/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/easystats/correlation", - "url": "https://api.github.com/repos/easystats/correlation", + "url": "https://github.com/easystats/correlation", "data": { "timestamp": "2020-07-19 00:17:12.906150", "name": "correlation", - "url": "https://api.github.com/repos/easystats/correlation", + "url": "https://github.com/easystats/correlation", "full_name": "easystats/correlation", "html_url": "https://github.com/easystats/correlation", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.5281/zenodo.3943771", "name": "correlation", "full_name": "easystats/correlation", - "html_url": "https://github.com/easystats/correlation", "private": false, "description": ":link: Methods for Correlation Analysis", "created_at": "2019-02-20T11:19:54Z", diff --git a/database/github/econ-ark/HARK/metadata.json b/database/github/econ-ark/HARK/metadata.json index 4883abe41..0c4ec9dd1 100644 --- a/database/github/econ-ark/HARK/metadata.json +++ b/database/github/econ-ark/HARK/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/econ-ark/HARK", - "url": "https://api.github.com/repos/econ-ark/HARK", + "url": "https://github.com/econ-ark/HARK", "data": { "timestamp": "2020-07-04 13:22:41.518490", "name": "HARK", - "url": "https://api.github.com/repos/econ-ark/HARK", + "url": "https://github.com/econ-ark/HARK", "full_name": "econ-ark/HARK", "html_url": "https://github.com/econ-ark/HARK", "private": false, @@ -36,7 +36,6 @@ }, "name": "HARK", "full_name": "econ-ark/HARK", - "html_url": "https://github.com/econ-ark/HARK", "private": false, "description": "Heterogenous Agents Resources & toolKit", "created_at": "2016-01-26T18:04:38Z", diff --git a/database/github/edwardoughton/itmlogic/metadata.json b/database/github/edwardoughton/itmlogic/metadata.json index aa6dc2b30..c1cbe1671 100644 --- a/database/github/edwardoughton/itmlogic/metadata.json +++ b/database/github/edwardoughton/itmlogic/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/edwardoughton/itmlogic", - "url": "https://api.github.com/repos/edwardoughton/itmlogic", + "url": "https://github.com/edwardoughton/itmlogic", "data": { "timestamp": "2020-07-12 00:26:30.462257", "name": "itmlogic", - "url": "https://api.github.com/repos/edwardoughton/itmlogic", + "url": "https://github.com/edwardoughton/itmlogic", "full_name": "edwardoughton/itmlogic", "html_url": "https://github.com/edwardoughton/itmlogic", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.5281/zenodo.3931350", "name": "itmlogic", "full_name": "edwardoughton/itmlogic", - "html_url": "https://github.com/edwardoughton/itmlogic", "private": false, "description": "Longley-Rice Irregular Terrain Model (itmlogic)", "created_at": "2019-06-13T14:38:00Z", diff --git a/database/github/eggnogdb/eggnog-mapper/metadata.json b/database/github/eggnogdb/eggnog-mapper/metadata.json index 70ce287a3..0286da672 100644 --- a/database/github/eggnogdb/eggnog-mapper/metadata.json +++ b/database/github/eggnogdb/eggnog-mapper/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/eggnogdb/eggnog-mapper", - "url": null, + "url": "https://github.com/eggnogdb/eggnog-mapper", "data": { "title": "EggNOG\u2011mapper", "url": "https://github.com/eggnogdb/eggnog-mapper", diff --git a/database/github/egjergo/galcem/metadata.json b/database/github/egjergo/GalCEM/metadata.json similarity index 100% rename from database/github/egjergo/galcem/metadata.json rename to database/github/egjergo/GalCEM/metadata.json diff --git a/database/github/eltevo/steps/metadata.json b/database/github/eltevo/StePS/metadata.json similarity index 100% rename from database/github/eltevo/steps/metadata.json rename to database/github/eltevo/StePS/metadata.json diff --git a/database/github/entangled/entangled/metadata.json b/database/github/entangled/entangled/metadata.json index d8eb535a5..547983673 100644 --- a/database/github/entangled/entangled/metadata.json +++ b/database/github/entangled/entangled/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/entangled/entangled", - "url": "https://api.github.com/repos/entangled/entangled", + "url": "https://github.com/entangled/entangled", "data": { "timestamp": "2020-07-05 00:17:27.043027", "name": "entangled", - "url": "https://api.github.com/repos/entangled/entangled", + "url": "https://github.com/entangled/entangled", "full_name": "entangled/entangled", "html_url": "https://github.com/entangled/entangled", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3877116", "name": "entangled", "full_name": "entangled/entangled", - "html_url": "https://github.com/entangled/entangled", "private": false, "description": "bi-directional tangle daemon for literate programming", "created_at": "2018-12-07T15:37:48Z", diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-absence.tsv b/database/github/equadratures/equadratures/criteria-RSE-absence.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-absence.tsv rename to database/github/equadratures/equadratures/criteria-RSE-absence.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-citation.tsv b/database/github/equadratures/equadratures/criteria-RSE-citation.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-citation.tsv rename to database/github/equadratures/equadratures/criteria-RSE-citation.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-domain-intention.tsv b/database/github/equadratures/equadratures/criteria-RSE-domain-intention.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-domain-intention.tsv rename to database/github/equadratures/equadratures/criteria-RSE-domain-intention.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-question-intention.tsv b/database/github/equadratures/equadratures/criteria-RSE-question-intention.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-question-intention.tsv rename to database/github/equadratures/equadratures/criteria-RSE-question-intention.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-research-intention.tsv b/database/github/equadratures/equadratures/criteria-RSE-research-intention.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-research-intention.tsv rename to database/github/equadratures/equadratures/criteria-RSE-research-intention.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-usage.tsv b/database/github/equadratures/equadratures/criteria-RSE-usage.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/criteria-RSE-usage.tsv rename to database/github/equadratures/equadratures/criteria-RSE-usage.tsv diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/metadata.json b/database/github/equadratures/equadratures/metadata.json similarity index 90% rename from database/github/Effective-Quadratures/Effective-Quadratures/metadata.json rename to database/github/equadratures/equadratures/metadata.json index 63d1e433d..8a1fdf514 100644 --- a/database/github/Effective-Quadratures/Effective-Quadratures/metadata.json +++ b/database/github/equadratures/equadratures/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/Effective-Quadratures/Effective-Quadratures", - "url": "https://api.github.com/repos/Effective-Quadratures/Effective-Quadratures", + "url": "https://github.com/equadratures/equadratures", "data": { "timestamp": "2020-07-04 13:22:18.914509", "name": "Effective-Quadratures", - "url": "https://api.github.com/repos/Effective-Quadratures/Effective-Quadratures", + "url": "https://github.com/equadratures/equadratures", "full_name": "Effective-Quadratures/Effective-Quadratures", "html_url": "https://github.com/Effective-Quadratures/Effective-Quadratures", "private": false, @@ -36,7 +36,6 @@ }, "name": "Effective-Quadratures", "full_name": "Effective-Quadratures/Effective-Quadratures", - "html_url": "https://github.com/Effective-Quadratures/Effective-Quadratures", "private": false, "description": null, "created_at": "2016-03-23T10:15:19Z", diff --git a/database/github/Effective-Quadratures/Effective-Quadratures/taxonomy.tsv b/database/github/equadratures/equadratures/taxonomy.tsv similarity index 100% rename from database/github/Effective-Quadratures/Effective-Quadratures/taxonomy.tsv rename to database/github/equadratures/equadratures/taxonomy.tsv diff --git a/database/github/equib/equib/metadata.json b/database/github/equib/EQUIB/metadata.json similarity index 100% rename from database/github/equib/equib/metadata.json rename to database/github/equib/EQUIB/metadata.json diff --git a/database/github/etal/cnvkit/metadata.json b/database/github/etal/cnvkit/metadata.json index 1ab8f2f2f..dda7ee131 100644 --- a/database/github/etal/cnvkit/metadata.json +++ b/database/github/etal/cnvkit/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/etal/cnvkit", - "url": null, + "url": "https://github.com/etal/cnvkit", "data": { "title": "CNVkit", "url": "https://github.com/etal/cnvkit", diff --git a/database/github/fredericlemoine/goalign/metadata.json b/database/github/evolbioinfo/goalign/metadata.json similarity index 100% rename from database/github/fredericlemoine/goalign/metadata.json rename to database/github/evolbioinfo/goalign/metadata.json diff --git a/database/github/cl3425/Clairvoyance/metadata.json b/database/github/exoclam/Clairvoyance/metadata.json similarity index 91% rename from database/github/cl3425/Clairvoyance/metadata.json rename to database/github/exoclam/Clairvoyance/metadata.json index 16c045801..79dc4e67a 100644 --- a/database/github/cl3425/Clairvoyance/metadata.json +++ b/database/github/exoclam/Clairvoyance/metadata.json @@ -1,14 +1,14 @@ { "parser": "github", "uid": "github/cl3425/Clairvoyance", - "url": "https://github.com/cl3425/Clairvoyance", + "url": "https://github.com/exoclam/Clairvoyance", "data": { "doi": [ "https://ui.adsabs.harvard.edu/abs/2017MNRAS.465.3495K", "https://ui.adsabs.harvard.edu/abs/2016ascl.soft11008K/abstract" ], "title": "Transit Clairvoyance: Predicting multiple-planet systems for TESS", - "url": "https://github.com/cl3425/Clairvoyance", + "url": "https://github.com/exoclam/Clairvoyance", "name": "Clairvoyance", "full_name": "cl3425/Clairvoyance", "html_url": "https://github.com/cl3425/Clairvoyance", diff --git a/database/github/exosports/homer/metadata.json b/database/github/exosports/HOMER/metadata.json similarity index 100% rename from database/github/exosports/homer/metadata.json rename to database/github/exosports/HOMER/metadata.json diff --git a/database/github/lsds/faasm/metadata.json b/database/github/faasm/faasm/metadata.json similarity index 100% rename from database/github/lsds/faasm/metadata.json rename to database/github/faasm/faasm/metadata.json diff --git a/database/github/Fermipy/fermipy/metadata.json b/database/github/fermiPy/fermipy/metadata.json similarity index 100% rename from database/github/Fermipy/fermipy/metadata.json rename to database/github/fermiPy/fermipy/metadata.json diff --git a/database/github/fforster/delight/metadata.json b/database/github/fforster/DELIGHT/metadata.json similarity index 100% rename from database/github/fforster/delight/metadata.json rename to database/github/fforster/DELIGHT/metadata.json diff --git a/database/github/JLiangLab/TransVW/metadata.json b/database/github/fhaghighi/TransVW/metadata.json similarity index 100% rename from database/github/JLiangLab/TransVW/metadata.json rename to database/github/fhaghighi/TransVW/metadata.json diff --git a/database/github/mrvollger/fibertools-rs/metadata.json b/database/github/fiberseq/fibertools-rs/metadata.json similarity index 90% rename from database/github/mrvollger/fibertools-rs/metadata.json rename to database/github/fiberseq/fibertools-rs/metadata.json index b55c9cbbe..4aaa61df6 100644 --- a/database/github/mrvollger/fibertools-rs/metadata.json +++ b/database/github/fiberseq/fibertools-rs/metadata.json @@ -1,10 +1,10 @@ { "parser": "github", "uid": "github/mrvollger/fibertools-rs", - "url": "https://github.com/mrvollger/fibertools-rs", + "url": "https://github.com/fiberseq/fibertools-rs", "data": { "title": "fibertools\u2011rs", - "url": "https://github.com/mrvollger/fibertools-rs", + "url": "https://github.com/fiberseq/fibertools-rs", "credit": [], "tags": [ "high-throughput-sequencing" diff --git a/database/github/forceflow1049/phast/metadata.json b/database/github/forceflow1049/PhAst/metadata.json similarity index 100% rename from database/github/forceflow1049/phast/metadata.json rename to database/github/forceflow1049/PhAst/metadata.json diff --git a/database/github/fraserw/TRIPPy/metadata.json b/database/github/fraserw/trippy/metadata.json similarity index 100% rename from database/github/fraserw/TRIPPy/metadata.json rename to database/github/fraserw/trippy/metadata.json diff --git a/database/github/ekg/freebayes/metadata.json b/database/github/freebayes/freebayes/freebayes/metadata.json similarity index 100% rename from database/github/ekg/freebayes/metadata.json rename to database/github/freebayes/freebayes/freebayes/metadata.json diff --git a/database/github/gagneurlab/drop/metadata.json b/database/github/gagneurlab/drop/metadata.json index d575c892a..d78f1dd91 100644 --- a/database/github/gagneurlab/drop/metadata.json +++ b/database/github/gagneurlab/drop/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/gagneurlab/drop", - "url": null, + "url": "https://github.com/gagneurlab/drop", "data": { "title": "DROP", "url": "https://github.com/gagneurlab/drop", @@ -43,4 +43,4 @@ ], "timestamp": "2022-07-18 17:43:39.955895" } -} \ No newline at end of file +} diff --git a/database/github/genotoul-bioinfo/dgenies/metadata.json b/database/github/genotoul-bioinfo/dgenies/metadata.json index 288416f52..fe37f44d1 100644 --- a/database/github/genotoul-bioinfo/dgenies/metadata.json +++ b/database/github/genotoul-bioinfo/dgenies/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/genotoul-bioinfo/dgenies", - "url": "https://api.github.com/repos/genotoul-bioinfo/dgenies", + "url": "https://github.com/genotoul-bioinfo/dgenies", "data": { "timestamp": "2020-07-05 00:17:52.843773", "name": "dgenies", - "url": "https://api.github.com/repos/genotoul-bioinfo/dgenies", + "url": "https://github.com/genotoul-bioinfo/dgenies", "full_name": "genotoul-bioinfo/dgenies", "html_url": "https://github.com/genotoul-bioinfo/dgenies", "private": false, @@ -36,7 +36,6 @@ }, "name": "dgenies", "full_name": "genotoul-bioinfo/dgenies", - "html_url": "https://github.com/genotoul-bioinfo/dgenies", "private": false, "description": "Dotplot large Genomes in an Interactive, Efficient and Simple way", "created_at": "2018-02-20T13:42:27Z", diff --git a/database/github/geopandas/geopandas/metadata.json b/database/github/geopandas/geopandas/metadata.json index 708789093..51324fa4b 100644 --- a/database/github/geopandas/geopandas/metadata.json +++ b/database/github/geopandas/geopandas/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/geopandas/geopandas", - "url": "https://api.github.com/repos/geopandas/geopandas", + "url": "https://github.com/geopandas/geopandas", "data": { "timestamp": "2020-07-04 13:22:36.400025", "name": "geopandas", - "url": "https://api.github.com/repos/geopandas/geopandas", + "url": "https://github.com/geopandas/geopandas", "full_name": "geopandas/geopandas", "html_url": "https://github.com/geopandas/geopandas", "private": false, @@ -36,7 +36,6 @@ }, "name": "geopandas", "full_name": "geopandas/geopandas", - "html_url": "https://github.com/geopandas/geopandas", "private": false, "description": "Python tools for geographic data", "created_at": "2013-06-27T17:03:47Z", diff --git a/database/github/gijut/gnucash/metadata.json b/database/github/gijut/gnucash/metadata.json index 625926759..257497a53 100644 --- a/database/github/gijut/gnucash/metadata.json +++ b/database/github/gijut/gnucash/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/gijut/gnucash", - "url": "https://api.github.com/repos/gijut/gnucash", + "url": "https://github.com/gijut/gnucash", "data": { "timestamp": "2020-07-05 00:17:53.022588", "name": "gnucash", - "url": "https://api.github.com/repos/gijut/gnucash", + "url": "https://github.com/gijut/gnucash", "full_name": "gijut/gnucash", "html_url": "https://github.com/gijut/gnucash", "private": false, @@ -36,7 +36,6 @@ }, "name": "gnucash", "full_name": "gijut/gnucash", - "html_url": "https://github.com/gijut/gnucash", "private": false, "description": "Public Mirror of code.gnucash.org/gnucash", "created_at": "2016-01-26T13:17:43Z", diff --git a/database/github/giswqs/geemap/metadata.json b/database/github/giswqs/geemap/metadata.json index 05e89e037..ef34edf37 100644 --- a/database/github/giswqs/geemap/metadata.json +++ b/database/github/giswqs/geemap/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/giswqs/geemap", - "url": "https://api.github.com/repos/giswqs/geemap", + "url": "https://github.com/giswqs/geemap", "data": { "timestamp": "2020-07-19 00:17:13.571575", "name": "geemap", - "url": "https://api.github.com/repos/giswqs/geemap", + "url": "https://github.com/giswqs/geemap", "full_name": "giswqs/geemap", "html_url": "https://github.com/giswqs/geemap", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.6084/m9.figshare.12608834.v1", "name": "geemap", "full_name": "giswqs/geemap", - "html_url": "https://github.com/giswqs/geemap", "private": false, "description": "A Python package for interactive mapping with Google Earth Engine, ipyleaflet, and ipywidgets", "created_at": "2020-03-08T15:21:09Z", diff --git a/database/github/grant-m-s/astronomicAL/metadata.json b/database/github/grant-m-s/AstronomicAL/metadata.json similarity index 100% rename from database/github/grant-m-s/astronomicAL/metadata.json rename to database/github/grant-m-s/AstronomicAL/metadata.json diff --git a/database/github/dgarrimar/sqtlseeker2-nf/metadata.json b/database/github/guigolab/sqtlseeker2-nf/metadata.json similarity index 91% rename from database/github/dgarrimar/sqtlseeker2-nf/metadata.json rename to database/github/guigolab/sqtlseeker2-nf/metadata.json index 08084a6cf..304aa848c 100644 --- a/database/github/dgarrimar/sqtlseeker2-nf/metadata.json +++ b/database/github/guigolab/sqtlseeker2-nf/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/dgarrimar/sqtlseeker2-nf", - "url": "https://api.github.com/repos/dgarrimar/sqtlseeker2-nf", + "url": "https://github.com/guigolab/sqtlseeker2-nf", "data": { "timestamp": "2020-07-26 00:17:05.182459", "name": "sqtlseeker2-nf", - "url": "https://api.github.com/repos/dgarrimar/sqtlseeker2-nf", + "url": "https://github.com/guigolab/sqtlseeker2-nf", "full_name": "dgarrimar/sqtlseeker2-nf", "html_url": "https://github.com/dgarrimar/sqtlseeker2-nf", "private": false, @@ -37,7 +37,6 @@ "doi": "10.1038/ncomms5698", "name": "sqtlseeker2-nf", "full_name": "dgarrimar/sqtlseeker2-nf", - "html_url": "https://github.com/dgarrimar/sqtlseeker2-nf", "private": false, "description": "An automated sQTL mapping pipeline using Nextflow", "created_at": "2017-11-28T17:07:19Z", diff --git a/database/github/williamjameshandley/fgivenx/metadata.json b/database/github/handley-lab/fgivenx/metadata.json similarity index 90% rename from database/github/williamjameshandley/fgivenx/metadata.json rename to database/github/handley-lab/fgivenx/metadata.json index d01ece611..0602a8572 100644 --- a/database/github/williamjameshandley/fgivenx/metadata.json +++ b/database/github/handley-lab/fgivenx/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", - "uid": "github/williamjameshandley/fgivenx", - "url": "https://github.com/williamjameshandley/fgivenx", + "uid": "github.com/handley-lab/fgivenx", + "url": "https://github.com/handley-lab/fgivenx", "data": { "doi": [ "https://ui.adsabs.harvard.edu/abs/2019PhRvD.100b3501H", @@ -9,7 +9,7 @@ "https://ui.adsabs.harvard.edu/abs/2019ascl.soft09014H/abstract" ], "title": "fgivenx: Functional posterior plotter", - "url": "https://github.com/williamjameshandley/fgivenx", + "url": "https://github.com/handley-lab/fgivenx", "name": "fgivenx", "full_name": "williamjameshandley/fgivenx", "html_url": "https://github.com/williamjameshandley/fgivenx", @@ -49,4 +49,4 @@ "timestamp": "2022-07-17 17:15:51.474703", "avatar": "https://avatars.githubusercontent.com/u/3708486?v=4" } -} \ No newline at end of file +} diff --git a/database/github/haowenz/chromap/metadata.json b/database/github/haowenz/chromap/metadata.json index e03ab5932..e6381487e 100644 --- a/database/github/haowenz/chromap/metadata.json +++ b/database/github/haowenz/chromap/metadata.json @@ -1,7 +1,7 @@ { "parser": "github", "uid": "github/haowenz/chromap", - 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"url": "https://api.github.com/repos/hrwakeford/ExoTiC-ISM", + "url": "https://github.com/hrwakeford/ExoTiC-ISM", "data": { "timestamp": "2020-07-12 00:26:30.737396", "name": "ExoTiC-ISM", - "url": "https://api.github.com/repos/hrwakeford/ExoTiC-ISM", + "url": "https://github.com/hrwakeford/ExoTiC-ISM", "full_name": "hrwakeford/ExoTiC-ISM", "html_url": "https://github.com/hrwakeford/ExoTiC-ISM", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.5281/zenodo.3923986", "name": "ExoTiC-ISM", "full_name": "hrwakeford/ExoTiC-ISM", - "html_url": "https://github.com/hrwakeford/ExoTiC-ISM", "private": false, "description": "This is a repository for the reduction pipeline detailed in Wakeford, et al., 2016, ApJ. 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"url": "https://api.github.com/repos/ihrke/pypillometry", + "url": "https://github.com/ihrke/pypillometry", "full_name": "ihrke/pypillometry", "html_url": "https://github.com/ihrke/pypillometry", "private": false, @@ -37,7 +37,6 @@ "doi": "https://doi.org/10.5281/zenodo.3925528", "name": "pypillometry", "full_name": "ihrke/pypillometry", - "html_url": "https://github.com/ihrke/pypillometry", "private": false, "description": "pupillometry with python", "created_at": "2019-10-14T09:46:03Z", diff --git a/database/github/iomega/paired-data-form/metadata.json b/database/github/iomega/paired-data-form/metadata.json index 5b2b3951f..2d746f871 100644 --- a/database/github/iomega/paired-data-form/metadata.json +++ b/database/github/iomega/paired-data-form/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/iomega/paired-data-form", - "url": "https://api.github.com/repos/iomega/paired-data-form", + "url": "https://github.com/iomega/paired-data-form", "data": { "timestamp": "2020-07-05 00:17:25.809828", "name": "paired-data-form", - "url": "https://api.github.com/repos/iomega/paired-data-form", + "url": "https://github.com/iomega/paired-data-form", "full_name": "iomega/paired-data-form", "html_url": "https://github.com/iomega/paired-data-form", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.2656630", "name": "paired-data-form", "full_name": "iomega/paired-data-form", - "html_url": "https://github.com/iomega/paired-data-form", "private": false, "description": "Linking mas spectra and genomic information to discover new chemistry", "created_at": "2018-11-02T16:55:28Z", diff --git a/database/github/iomega/spec2vec/metadata.json b/database/github/iomega/spec2vec/metadata.json index e2dfc1431..8d6007296 100644 --- a/database/github/iomega/spec2vec/metadata.json +++ b/database/github/iomega/spec2vec/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/iomega/spec2vec", - "url": "https://api.github.com/repos/iomega/spec2vec", + "url": "https://github.com/iomega/spec2vec", "data": { "timestamp": "2020-07-05 00:17:29.461435", "name": "spec2vec", - "url": "https://api.github.com/repos/iomega/spec2vec", + "url": "https://github.com/iomega/spec2vec", "full_name": "iomega/spec2vec", "html_url": "https://github.com/iomega/spec2vec", "private": false, @@ -36,7 +36,6 @@ }, "name": "spec2vec", "full_name": "iomega/spec2vec", - "html_url": "https://github.com/iomega/spec2vec", "private": false, "description": "Word2Vec based similarity measure of mass spectrometry data.", "created_at": "2020-05-13T13:35:33Z", diff --git a/database/github/iomega/zenodo-upload/metadata.json b/database/github/iomega/zenodo-upload/metadata.json index babb6b9cc..f86032104 100644 --- a/database/github/iomega/zenodo-upload/metadata.json +++ b/database/github/iomega/zenodo-upload/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/iomega/zenodo-upload", - "url": "https://api.github.com/repos/iomega/zenodo-upload", + "url": "https://github.com/iomega/zenodo-upload", "data": { "timestamp": "2020-07-05 00:17:29.139751", "name": "zenodo-upload", - "url": "https://api.github.com/repos/iomega/zenodo-upload", + "url": "https://github.com/iomega/zenodo-upload", "full_name": "iomega/zenodo-upload", "html_url": "https://github.com/iomega/zenodo-upload", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.3726850", "name": "zenodo-upload", "full_name": "iomega/zenodo-upload", - 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"url": "https://api.github.com/repos/nlesc-dirac/sagecal", + "url": "https://github.com/nlesc-dirac/sagecal", "data": { "timestamp": "2020-07-05 00:17:20.238519", "name": "sagecal", - "url": "https://api.github.com/repos/nlesc-dirac/sagecal", + "url": "https://github.com/nlesc-dirac/sagecal", "full_name": "nlesc-dirac/sagecal", "html_url": "https://github.com/nlesc-dirac/sagecal", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1051168", "name": "sagecal", "full_name": "nlesc-dirac/sagecal", - "html_url": "https://github.com/nlesc-dirac/sagecal", "private": false, "description": "SAGECal is a very fast, memory efficient and GPU accelerated radio interferometric calibration program. 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"url": "https://api.github.com/repos/nlesc-sherlock/emma", + "url": "https://github.com/nlesc-sherlock/emma", "data": { "timestamp": "2020-07-05 00:17:21.170967", "name": "emma", - "url": "https://api.github.com/repos/nlesc-sherlock/emma", + "url": "https://github.com/nlesc-sherlock/emma", "full_name": "nlesc-sherlock/emma", "html_url": "https://github.com/nlesc-sherlock/emma", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.996294", "name": "emma", "full_name": "nlesc-sherlock/emma", - "html_url": "https://github.com/nlesc-sherlock/emma", "private": false, "description": "Ansible playbook to create a cluster with GlusterFS, Docker, Spark and JupyterHub services", "created_at": "2017-02-12T19:57:58Z", diff --git a/database/github/nlppln/nlppln/metadata.json b/database/github/nlppln/nlppln/metadata.json index ccdf8453e..1f4a909cc 100644 --- a/database/github/nlppln/nlppln/metadata.json +++ b/database/github/nlppln/nlppln/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/nlppln/nlppln", - 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"url": "https://api.github.com/repos/numba/numba", + "url": "https://github.com/numba/numba", "full_name": "numba/numba", "html_url": "https://github.com/numba/numba", "private": false, @@ -36,7 +36,6 @@ }, "name": "numba", "full_name": "numba/numba", - "html_url": "https://github.com/numba/numba", "private": false, "description": "NumPy aware dynamic Python compiler using LLVM", "created_at": "2012-03-08T11:12:43Z", diff --git a/database/github/numpy/numpy/metadata.json b/database/github/numpy/numpy/metadata.json index 03ea95cfa..15d018c44 100644 --- a/database/github/numpy/numpy/metadata.json +++ b/database/github/numpy/numpy/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/numpy/numpy", - "url": "https://api.github.com/repos/numpy/numpy", + "url": "https://github.com/numpy/numpy", "data": { "timestamp": "2020-07-04 13:22:17.344529", "name": "numpy", - "url": "https://api.github.com/repos/numpy/numpy", + "url": "https://github.com/numpy/numpy", "full_name": "numpy/numpy", "html_url": "https://github.com/numpy/numpy", "private": false, @@ -36,7 +36,6 @@ }, "name": "numpy", "full_name": "numpy/numpy", - 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"url": "https://api.github.com/repos/surf-eds/one-button-compute", + "url": "https://github.com/surf-eds/one-button-compute", "data": { "timestamp": "2020-07-05 00:17:21.928716", "name": "one-button-compute", - "url": "https://api.github.com/repos/surf-eds/one-button-compute", + "url": "https://github.com/surf-eds/one-button-compute", "full_name": "surf-eds/one-button-compute", "html_url": "https://github.com/surf-eds/one-button-compute", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1033816", "name": "one-button-compute", "full_name": "surf-eds/one-button-compute", - "html_url": "https://github.com/surf-eds/one-button-compute", "private": false, "description": "Web API for dynamic compute", "created_at": "2015-10-01T09:31:05Z", diff --git a/database/github/sverhoeven/docker-cartodb/metadata.json b/database/github/sverhoeven/docker-cartodb/metadata.json index 2792d5da1..c4bbea101 100644 --- a/database/github/sverhoeven/docker-cartodb/metadata.json +++ b/database/github/sverhoeven/docker-cartodb/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/sverhoeven/docker-cartodb", - 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"https://github.com/wadpac/GGIR", "full_name": "wadpac/GGIR", "html_url": "https://github.com/wadpac/GGIR", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.1051064", "name": "GGIR", "full_name": "wadpac/GGIR", - "html_url": "https://github.com/wadpac/GGIR", "private": false, "description": "Code corresponding to R package GGIR", "created_at": "2017-04-13T13:20:23Z", diff --git a/database/github/wdecoster/NanoComp/metadata.json b/database/github/wdecoster/nanocomp/NanoComp/metadata.json similarity index 100% rename from database/github/wdecoster/NanoComp/metadata.json rename to database/github/wdecoster/nanocomp/NanoComp/metadata.json diff --git a/database/github/weecology/retriever/metadata.json b/database/github/weecology/retriever/metadata.json index f3e5f175b..8270a99a0 100644 --- a/database/github/weecology/retriever/metadata.json +++ b/database/github/weecology/retriever/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/weecology/retriever", - "url": 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100644 --- a/database/github/NLeSC/xenon-cli/metadata.json +++ b/database/github/xenon-middleware/xenon-cli/metadata.json @@ -1,11 +1,11 @@ { "parser": "github", "uid": "github/NLeSC/xenon-cli", - "url": "https://api.github.com/repos/xenon-middleware/xenon-cli", + "url": "https://github.com/xenon-middleware/xenon-cli", "data": { "timestamp": "2020-07-05 00:17:22.948309", "name": "xenon-cli", - "url": "https://api.github.com/repos/xenon-middleware/xenon-cli", + "url": "https://github.com/xenon-middleware/xenon-cli", "full_name": "xenon-middleware/xenon-cli", "html_url": "https://github.com/xenon-middleware/xenon-cli", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597603", "name": "xenon-cli", "full_name": "xenon-middleware/xenon-cli", - "html_url": "https://github.com/xenon-middleware/xenon-cli", "private": false, "description": "Perform files and jobs operations with Xenon library from command line", "created_at": "2017-02-01T16:58:46Z", diff --git 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"url": "https://api.github.com/repos/xenon-middleware/xenon", + "url": "https://github.com/xenon-middleware/xenon", "full_name": "xenon-middleware/xenon", "html_url": "https://github.com/xenon-middleware/xenon", "private": false, @@ -37,7 +37,6 @@ "doi": "10.5281/zenodo.597993", "name": "xenon", "full_name": "xenon-middleware/xenon", - "html_url": "https://github.com/xenon-middleware/xenon", "private": false, "description": "A middleware abstraction library that provides a simple programming interface to various compute and storage resources.", "created_at": "2013-04-05T08:24:15Z", diff --git a/database/github/xstarkit/mpi_xstar/metadata.json b/database/github/xstarkit/MPI_XSTAR/metadata.json similarity index 100% rename from database/github/xstarkit/mpi_xstar/metadata.json rename to database/github/xstarkit/MPI_XSTAR/metadata.json diff --git a/database/github/yanzhanglab/Graph2GO/metadata.json b/database/github/yanzhanglab/Graph2GO/metadata.json index b48ba22dc..bee24fdff 100644 --- 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