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chore(tests): add gherkin test files to reana specifications (#73) #73

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Sep 19, 2024
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chore(tests): add gherkin test files to reana specifications (#73) #73

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a9806c0
feat(tests): add gherkin test files to reana specifications (#73)
ajclyall Aug 1, 2024
d88f8ce
ci(snakemake-local-run): upgrade ROOT dependency (#73)
mdonadoni Sep 18, 2024
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10 changes: 8 additions & 2 deletions .github/workflows/ci.yml
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Expand Up @@ -127,10 +127,16 @@ jobs:
uses: reanahub/reana-github-actions/local-run@v1
with:
commands: |
# Install ROOT dependencies
sudo apt-get update -y
sudo apt-get install binutils cmake dpkg-dev g++ gcc libssl-dev git libx11-dev libxext-dev libxft-dev libxpm-dev python3 libtbb-dev libvdt-dev libgif-dev

# Install ROOT
wget https://root.cern/download/root_v6.24.02.Linux-ubuntu20-x86_64-gcc9.3.tar.gz
tar -xzvf root_v6.24.02.Linux-ubuntu20-x86_64-gcc9.3.tar.gz
# ROOT is needed as Snakemake does not run the workflow steps in containers
wget -q https://root.cern/download/root_v6.32.04.Linux-ubuntu24.04-x86_64-gcc13.2.tar.gz
tar xfz root_v6.32.04.Linux-ubuntu24.04-x86_64-gcc13.2.tar.gz
source root/bin/thisroot.sh

rm -rf snakemake-local-run && mkdir -p snakemake-local-run && cd snakemake-local-run
pip install 'pulp<2.8' snakemake
cp -a ../code .
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1 change: 1 addition & 0 deletions AUTHORS.md
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Expand Up @@ -2,6 +2,7 @@

The list of contributors in alphabetical order:

- [Alastair Lyall](https://orcid.org/0009-0000-4955-8935)
- [Ana Trisovic](https://orcid.org/0000-0003-1991-0533)
- [Anton Khodak](https://orcid.org/0000-0003-3263-4553)
- [Audrius Mecionis](https://orcid.org/0000-0002-3759-1663)
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5 changes: 5 additions & 0 deletions reana-cwl.yaml
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Expand Up @@ -13,3 +13,8 @@ workflow:
outputs:
files:
- outputs/plot.png
tests:
files:
- tests/cwl/log-messages.feature
- tests/cwl/run-duration.feature
- tests/cwl/workspace-files.feature
5 changes: 5 additions & 0 deletions reana-snakemake.yaml
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Expand Up @@ -13,3 +13,8 @@ workflow:
outputs:
files:
- results/plot.png
tests:
files:
- tests/snakemake/log-messages.feature
- tests/snakemake/run-duration.feature
- tests/snakemake/workspace-files.feature
5 changes: 5 additions & 0 deletions reana-yadage.yaml
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Expand Up @@ -15,3 +15,8 @@ workflow:
outputs:
files:
- fitdata/plot.png
tests:
files:
- tests/yadage/log-messages.feature
- tests/yadage/run-duration.feature
- tests/yadage/workspace-files.feature
5 changes: 5 additions & 0 deletions reana.yaml
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Expand Up @@ -24,3 +24,8 @@ workflow:
outputs:
files:
- results/plot.png
tests:
files:
- tests/serial/log-messages.feature
- tests/serial/run-duration.feature
- tests/serial/workspace-files.feature
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