Skip to content

Commit

Permalink
wip remove root
Browse files Browse the repository at this point in the history
  • Loading branch information
mdonadoni committed Sep 18, 2024
1 parent e877a64 commit 37f3644
Showing 1 changed file with 1 addition and 5 deletions.
6 changes: 1 addition & 5 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -127,14 +127,10 @@ jobs:
uses: reanahub/reana-github-actions/local-run@v1
with:
commands: |
# Install ROOT
wget https://root.cern/download/root_v6.32.04.Linux-ubuntu24.04-x86_64-gcc13.2.tar.gz
tar -xzvf root_v6.32.04.Linux-ubuntu24.04-x86_64-gcc13.2.tar.gz
source root/bin/thisroot.sh
rm -rf snakemake-local-run && mkdir -p snakemake-local-run && cd snakemake-local-run
pip install 'pulp<2.8' snakemake
cp -a ../code .
snakemake -s ../workflow/snakemake/Snakefile --configfile ../workflow/snakemake/inputs.yaml -p --cores 1
snakemake --use-singularity -s ../workflow/snakemake/Snakefile --configfile ../workflow/snakemake/inputs.yaml -p --cores 1
ls -l `pwd`/results/plot.png
cd .. && rm -rf snakemake-local-run
Expand Down

0 comments on commit 37f3644

Please sign in to comment.