build.gradle

buildscript {
    repositories {
        jcenter()
    }
    dependencies {
        classpath 'com.github.jengelman.gradle.plugins:shadow:2.0.1'
    }
}

apply plugin: 'java'
apply plugin: 'com.github.johnrengelman.shadow'

dependencies {
    compile fileTree(dir: 'libs/', include: '*.jar')
}

task csvChannelJar(type: com.github.jengelman.gradle.plugins.shadow.tasks.ShadowJar) {
    classifier = 'all'
    from(sourceSets.main.output) {
        baseName = 'FlowJoPluginDataDumpCSVChannel'
        include "org/ramaciotti/utilities/csvchannel/**"
    }
    configurations = [project.configurations.compile]
}

task csvScaleJar(type: com.github.jengelman.gradle.plugins.shadow.tasks.ShadowJar) {
    classifier = 'all'
    from(sourceSets.main.output) {
        baseName = 'FlowJoPluginDataDumpCSVScale'
        include "org/ramaciotti/utilities/csvscale/**"
    }
    configurations = [project.configurations.compile]
}

task fcsJar(type: com.github.jengelman.gradle.plugins.shadow.tasks.ShadowJar) {
    classifier = 'all'
    from(sourceSets.main.output) {
        baseName = 'FlowJoPluginDataDumpFCS'
        include "org/ramaciotti/utilities/fcs/**"
    }
    configurations = [project.configurations.compile]
}

task buildAll(dependsOn: ['csvChannelJar', 'csvScaleJar', 'fcsJar'])