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This repository was archived by the owner on Apr 25, 2025. It is now read-only.
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@@ -39,16 +39,17 @@ option for all cases. In general we recommend the following:
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.. _distributions:
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QIIME 2 2024.10 distributions
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As of 2024.10, QIIME 2 releases now include the following QIIME 2 distributions that are available for install:
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- ``amplicon``
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- ``metagenome``
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- ``pathogenome``
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- ``tiny``
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QIIME 2 2024.10 Amplicon Distribution
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The 2024.10 release of the QIIME 2 Amplicon Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
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- ``rescript``
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QIIME 2 2024.10 Metagenome Distribution
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The 2024.10 release of the QIIME 2 Metagenome Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
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- ``q2-vsearch``
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- ``rescript``
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QIIME 2 2024.10 Pathogenome Distribution
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The 2024.10 release of the QIIME 2 Metagenome Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
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- ``q2-amrfinderplus``
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- ``q2-assembly``
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- ``q2-demux``
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- ``q2-feature-classifier``
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- ``q2-feature-table``
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- ``q2-longitudinal``
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- ``q2-quality-control``
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- ``q2-sample-classifier``
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- ``q2-taxa``
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- ``q2-types``
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- ``q2-viromics``
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- ``q2-vizard``
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- ``rescript``
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QIIME 2 2024.10 Tiny Distribution
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The 2024.10 release of the QIIME 2 Tiny Distribution includes the QIIME 2 framework and ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
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- ``q2-types``
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The QIIME 2 Tiny Distribution is a minimal QIIME 2 environment that can be used by developers who are in need of a basic development environment, or community plugin users who do not need the entire Ampliconor Metagenome Distributions in their QIIME 2 environment.
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The QIIME 2 Tiny Distribution is a minimal QIIME 2 environment that can be used by developers who are in need of a basic development environment, or community plugin users who do not need the entire Amplicon, Metagenome or Pathogenome Distributions in their QIIME 2 environment.
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.. note:: The Amplicon Distribution is necessary to run the commands in the :doc:`QIIME 2 tutorials <../tutorials/index>`. If there are additional QIIME 2 plugins or interfaces you would like to install, please consult the relevant package(s) documentation.
<p>These instructions are for users with <ahref="https://support.apple.com/en-us/HT211814">Apple Silicon</a> chips (M1, M2, etc), and configures the installation of QIIME 2 in <ahref="https://developer.apple.com/documentation/apple-silicon/about-the-rosetta-translation-environment">Rosetta 2 emulation mode</a>.</p>
<p>These instructions are identical to the Linux instructions and are intended for users of the <ahref="https://learn.microsoft.com/en-us/windows/wsl/about">Windows Subsystem for Linux</a>.</p>
<p>These instructions are for users with <ahref="https://support.apple.com/en-us/HT211814">Apple Silicon</a> chips (M1, M2, etc), and configures the installation of QIIME 2 in <ahref="https://developer.apple.com/documentation/apple-silicon/about-the-rosetta-translation-environment">Rosetta 2 emulation mode</a>.</p>
<p>These instructions are identical to the Linux instructions and are intended for users of the <ahref="https://learn.microsoft.com/en-us/windows/wsl/about">Windows Subsystem for Linux</a>.</p>
<p>These instructions are for users with <ahref="https://support.apple.com/en-us/HT211814">Apple Silicon</a> chips (M1, M2, etc), and configures the installation of QIIME 2 in <ahref="https://developer.apple.com/documentation/apple-silicon/about-the-rosetta-translation-environment">Rosetta 2 emulation mode</a>.</p>
<p>These instructions are identical to the Linux instructions and are intended for users of the <ahref="https://learn.microsoft.com/en-us/windows/wsl/about">Windows Subsystem for Linux</a>.</p>
<p>These instructions are for users with <ahref="https://support.apple.com/en-us/HT211814">Apple Silicon</a> chips (M1, M2, etc), and configures the installation of QIIME 2 in <ahref="https://developer.apple.com/documentation/apple-silicon/about-the-rosetta-translation-environment">Rosetta 2 emulation mode</a>.</p>
<p>These instructions are identical to the Linux instructions and are intended for users of the <ahref="https://learn.microsoft.com/en-us/windows/wsl/about">Windows Subsystem for Linux</a>.</p>
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