GitHub - pkaurla/high-res-3D-tau: codes for projects using deep learning to segment tau and 3d reconstruction

pkaurla / high-res-3D-tau Public

codes for projects using deep learning to segment tau and 3d reconstruction

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 43 Commits
Micro-Manager-2.0beta_scanner		Micro-Manager-2.0beta_scanner
PyRegistration		PyRegistration
__pycache__		__pycache__
convnet		convnet
dataset_creator		dataset_creator
hm_normalization		hm_normalization
matlab		matlab
misc		misc
mri		mri
pipeline		pipeline
registration		registration
results		results
scripts		scripts
tests		tests
util		util
vizualization_utils		vizualization_utils
ImageUtil.py		ImageUtil.py
ImageUtil.pyc		ImageUtil.pyc
apply_ants_tform.sh		apply_ants_tform.sh
convert.py		convert.py
create_3d_volume.py		create_3d_volume.py
create_heatmap2block.py		create_heatmap2block.py
create_histo_masks.py		create_histo_masks.py
create_terastitch_xml.py		create_terastitch_xml.py
imoverlay.py		imoverlay.py
imoverlay.pyc		imoverlay.pyc
mask_histo_images.py		mask_histo_images.py
rescale_images.py		rescale_images.py
run_ants.sh		run_ants.sh
run_ants_v2.sh		run_ants_v2.sh
run_apply_masks_create_nii.py		run_apply_masks_create_nii.py
run_export_heatmap_metadata.py		run_export_heatmap_metadata.py
run_seg_background.py		run_seg_background.py
run_seg_background_v2.py		run_seg_background_v2.py
run_tile_segmentation.py		run_tile_segmentation.py
seg_background.py		seg_background.py
seg_background.pyc		seg_background.pyc
slice2nii.py		slice2nii.py
slice2nii.pyc		slice2nii.pyc
slice2nii_withLoop.py		slice2nii_withLoop.py