train.hdf5 without error, test.hdf5 comes with error

[ttkrpink]

Python 3.6.8,
numpy 1.16.0
Other files are the same.

data.py with train set works fine.
It seems the test set has the following error.

100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 40/40 [30:42<00:00, 48.46s/it]
12%|████████████████▉ | 1/8 [00:42<04:55, 42.26s/it]Traceback (most recent call last):█████████████████████████████████████████████████████████████████████████████████████████████████████| 3626/3626 [00:42<00:00, 47.51it/s]
File "src/data.py", line 136, in
main(config)
File "src/data.py", line 132, in main
return preprocess(config.split)
File "src/data.py", line 114, in preprocess
dataSaver(testset, 'dataset/test.hdf5', 'dataset/testlabel.hdf5')
File "src/data.py", line 92, in dataSaver
dataprocess()
File "src/data.py", line 60, in dataprocess
record = rdrecord('dataset/'+ num, smooth_frames= True)
File "F:\PyThon\virtual\36\lib\site-packages\wfdb\io\record.py", line 1232, in rdrecord
ignore_skew)
File "F:\PyThon\virtual\36\lib\site-packages\wfdb\io_signal.py", line 876, in _rd_segment
smooth_frames)[:, r_w_channel[fn]]
File "F:\PyThon\virtual\36\lib\site-packages\wfdb\io_signal.py", line 974, in _rd_dat_signals
sig_data = _blocks_to_samples(sig_data, total_process_samples, fmt)
File "F:\PyThon\virtual\36\lib\site-packages\wfdb\io_signal.py", line 1269, in _blocks_to_samples
sig[0::2] = sig_data[0::3] + 256 * np.bitwise_and(sig_data[1::3], 0x0f)
ValueError: could not broadcast input array from shape (283885) into shape (650000)
Exception ignored in: <bound method tqdm.del of 12%|████████████████▉ | 1/8 [00:42<04:55, 42.26s/it]>
Traceback (most recent call last):
File "F:\PyThon\virtual\36\lib\site-packages\tqdm_tqdm.py", line 931, in del
self.close()
File "F:\PyThon\virtual\36\lib\site-packages\tqdm_tqdm.py", line 1133, in close
self._decr_instances(self)
File "F:\PyThon\virtual\36\lib\site-packages\tqdm_tqdm.py", line 496, in _decr_instances
cls.monitor.exit()
File "F:\PyThon\virtual\36\lib\site-packages\tqdm_monitor.py", line 52, in exit
self.join()
File "F:\PyThon\3.6.8\lib\threading.py", line 1053, in join
raise RuntimeError("cannot join current thread")
RuntimeError: cannot join current thread

[wkzqn]

谢谢。您的邮件已收到，我会尽快处理。

[Shasmita]

Were you able to solve the above issue and run the application successfully?

[wkzqn]

谢谢。您的邮件已收到，我会尽快处理。

[sg4395]

Hi were you able to work this out?

[physhik]

I have never experienced such an error before. I will check out

[sg4395]

Thank you, please let me know! Best, ASEAN Get Outlook for iOS<https://aka.ms/o0ukef>

…

________________________________ From: Namshik Kim ***@***.***> Sent: Thursday, February 9, 2023 8:00:51 AM To: physhik/ecg-mit-bih ***@***.***> Cc: sg4395 ***@***.***>; Comment ***@***.***> Subject: Re: [physhik/ecg-mit-bih] train.hdf5 without error, test.hdf5 comes with error (Issue #12) I have never experienced such an error before. I will check out — Reply to this email directly, view it on GitHub<#12 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ATGH7BESNKZ7NSXFYXDNB5DWWQXTHANCNFSM5RD7EHKA>. You are receiving this because you commented.Message ID: ***@***.***>

[sg4395]

Hi Namshik, Were you able to take a look at the code and see if it runs? I think maybe the hdf5 file isn't being created for some reason. App.py encounters similar issue. By the way do you know if app.py requires the data to be 300+hz like the data you trained the model with? Or does it take any sampling rate data ? Best, Sean Get Outlook for iOS<https://aka.ms/o0ukef>

…

________________________________ From: Sean Guo ***@***.***> Sent: Friday, February 10, 2023 4:24:40 AM To: physhik/ecg-mit-bih ***@***.***>; physhik/ecg-mit-bih ***@***.***> Cc: Comment ***@***.***> Subject: Re: [physhik/ecg-mit-bih] train.hdf5 without error, test.hdf5 comes with error (Issue #12) Thank you, please let me know! Best, ASEAN Get Outlook for iOS<https://aka.ms/o0ukef>

________________________________ From: Namshik Kim ***@***.***> Sent: Thursday, February 9, 2023 8:00:51 AM To: physhik/ecg-mit-bih ***@***.***> Cc: sg4395 ***@***.***>; Comment ***@***.***> Subject: Re: [physhik/ecg-mit-bih] train.hdf5 without error, test.hdf5 comes with error (Issue #12) I have never experienced such an error before. I will check out — Reply to this email directly, view it on GitHub<#12 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ATGH7BESNKZ7NSXFYXDNB5DWWQXTHANCNFSM5RD7EHKA>. You are receiving this because you commented.Message ID: ***@***.***>

[sg4395]

I have never experienced such an error before. I will check out

Hi Namshik,
were you able to get it working?