VITEK example file from MDU

tests/data/vitek_output.txt

@@ -0,0 +1,3 @@
+Lab ID,Isolate Number,Patient Name,Patient ID,Patient Location,Specimen Type,Specimen Source,Collection Date,Testing Date,Organism Name,Organism Code,Bio Number,Percent Probability,ID Confidence,Selected BP Infection Site,AM-Ampicillin,AM-Other-Instrument,AM-Other-Expertized,AMC-Amoxicillin/Clavulanic Acid,AMC-Other-Instrument,AMC-Other-Expertized,AN-Amikacin,AN-Other-Instrument,AN-Other-Expertized,C-Chloramphenicol,C-Other-Instrument,C-Other-Expertized,CAZ-Ceftazidime,CAZ-Other-Instrument,CAZ-Other-Expertized,CIP-Ciprofloxacin,CIP-Other-Instrument,CIP-Other-Expertized,CM-Clindamycin,CM-Other-Instrument,CM-Other-Expertized,CN-Cefalexin,CN-Other-Instrument,CN-Other-Expertized,CRO-Ceftriaxone,CRO-Other-Instrument,CRO-Other-Expertized,CTX-Cefotaxime,CTX-Other-Instrument,CTX-Other-Expertized,CZ-Cefazolin,CZ-Other-Instrument,CZ-Other-Expertized,DAP-Daptomycin,DAP-Other-Instrument,DAP-Other-Expertized,E-Erythromycin,E-Other-Instrument,E-Other-Expertized,FA-Fusidic Acid,FA-Other-Instrument,FA-Other-Expertized,FEP-Cefepime,FEP-Other-Instrument,FEP-Other-Expertized,FOX-Cefoxitin,FOX-Other-Instrument,FOX-Other-Expertized,FT-Nitrofurantoin,FT-Other-Instrument,FT-Other-Expertized,GM-Gentamicin,GM-Other-Instrument,GM-Other-Expertized,HLG-Gentamicin High Level (synergy),HLG-Other-Instrument,HLG-Other-Expertized,ICR-Inducible Clindamycin Resistance,ICR-Other-Instrument,ICR-Other-Expertized,LEV-Levofloxacin,LEV-Other-Instrument,LEV-Other-Expertized,LNZ-Linezolid,LNZ-Other-Instrument,LNZ-Other-Expertized,MEM-Meropenem,MEM-Other-Instrument,MEM-Other-Expertized,MUP-Mupirocin,MUP-Other-Instrument,MUP-Other-Expertized,MXF-Moxifloxacin,MXF-Other-Instrument,MXF-Other-Expertized,NOR-Norfloxacin,NOR-Other-Instrument,NOR-Other-Expertized,OX1-Oxacillin,OX1-Other-Instrument,OX1-Other-Expertized,OXSF-Cefoxitin Screen,OXSF-Other-Instrument,OXSF-Other-Expertized,P-Benzylpenicillin,P-Other-Instrument,P-Other-Expertized,RA-Rifampicin,RA-Other-Instrument,RA-Other-Expertized,SXT-Trimethoprim/Sulfamethoxazole,SXT-Other-Instrument,SXT-Other-Expertized,TCC-Ticarcillin/Clavulanic Acid,TCC-Other-Instrument,TCC-Other-Expertized,TE-Tetracycline,TE-Other-Instrument,TE-Other-Expertized,TEC-Teicoplanin,TEC-Other-Instrument,TEC-Other-Expertized,TGC-Tigecycline,TGC-Other-Instrument,TGC-Other-Expertized,TM-Tobramycin,TM-Other-Instrument,TM-Other-Expertized,TMP-Trimethoprim,TMP-Other-Instrument,TMP-Other-Expertized,TZP-Piperacillin/Tazobactam,TZP-Other-Instrument,TZP-Other-Expertized,VA-Vancomycin,VA-Other-Instrument,VA-Other-Expertized
+0000000001,1,,,,,,,2024-07-05,Staph.aureus,MAU,,,,,,,,,,,,,,,,,,,,<=0.5,S,S,<=0.25,S,S,,S,S,,,,,,,,,,0.25,S,S,,,,<=0.5,S,S,,,,,,,,,,<=0.5,S,S,,,,NEG,-,-,,,,2,S,S,,,,<=2,,,,,,,,,0.5,S,S,NEG,-,-,>=0.5,R,R,<=0.5,S,S,<=10,S,S,,,,<=1,S,S,<=0.5,S,S,,,,,,,,,,,,,1,S,S
+0000000002,1,,,,,,,2024-07-05,K.pneumoniae,EKPN,,,,,>=32,R,R,<=2,S,S,<=2,S,S,,,,<=1,S,S,<=0.25,S,S,,,,,,,<=1,S,S,,S,S,<=4,S,S,,,,,,,,,,<=1,S,S,<=4,S,S,64,I,I,<=1,S,S,,,,,,,,,,,,,<=0.25,S,S,,,,,,,<=0.5,S,S,,,,,,,,,,,,,<=20,S,S,<=8,S,S,,,,,,,,,,<=1,S,S,<=0.5,S,S,<=4,S,S,,,