Repositories list

• autoparty

  Public
  JavaScript

  •

  MIT License

  •0•8•9•0•Updated Dec 15, 2024Dec 15, 2024

• e3fp

  Public
  3D molecular fingerprints

  pythoncheminformaticsfingerprint+ 3molecular3de3fp

  Python

  •

  GNU Lesser General Public License v3.0

  •33•124•17•1•Updated Nov 22, 2024Nov 22, 2024

• keiserlab.github.io

  Public
  keiserlab site

  Python

  •

  MIT License

  •1•4•0•1•Updated Nov 20, 2024Nov 20, 2024

• tangle-tracer

  Public
  Python

  •

  MIT License

  •0•3•1•0•Updated Nov 16, 2024Nov 16, 2024

• deepfish

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Oct 9, 2024Oct 9, 2024

• vae-anomaly-paper

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 6, 2024Oct 6, 2024

• dermato-paper

  Public
  Repo for Tada & Gaskins et al, bioRxiv (2024) [doi: 10.1101/2024.09.12.612732]

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Sep 11, 2024Sep 11, 2024

• torch_pgn

  Public
  Proximity Graph Networks

  HTML

  •

  MIT License

  •0•6•0•0•Updated Sep 10, 2024Sep 10, 2024

• chemprobe

  Public
  Python

  •

  MIT License

  •0•1•3•0•Updated Aug 28, 2024Aug 28, 2024

• rad

  Public
  C++

  •

  MIT License

  •1•5•0•0•Updated Jul 25, 2024Jul 25, 2024

• autofragdiff

  Public
  Python

  •

  MIT License

  •1•24•2•0•Updated May 23, 2024May 23, 2024

• metric-ion-classification

  Public
  Official repository for Metric Ion Classification (MIC) code and models

  Jupyter Notebook

  •

  MIT License

  •1•4•0•0•Updated Apr 26, 2024Apr 26, 2024

• LUNA

  Public
  Jupyter Notebook

  •

  MIT License

  •13•51•10•0•Updated Apr 2, 2024Apr 2, 2024

• 3d-genome-disruption-paper

  Public
  Jupyter Notebook

  •

  MIT License

  •0•3•0•0•Updated Aug 24, 2023Aug 24, 2023

• stochastic-negatives-paper

  Public
  Jupyter Notebook

  •0•4•0•2•Updated Jul 6, 2023Jul 6, 2023

• exceiver

  Public
  Python

  •

  MIT License

  •0•11•1•0•Updated Jun 6, 2023Jun 6, 2023

• amyloid-yolo-paper

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated May 17, 2023May 17, 2023

• trans-channel-paper

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Mar 7, 2022Mar 7, 2022

• consensus-learning-paper

  Public
  C

  •

  MIT License

  •2•1•0•0•Updated Dec 18, 2021Dec 18, 2021

• e3fp-paper

  Public
  3D molecular fingerprints (E3FP) paper repo

  pythoncheminformaticspaper+ 4fingerprintmolecular3de3fp

  Python

  •

  GNU Lesser General Public License v3.0

  •2•15•2•0•Updated Mar 14, 2021Mar 14, 2021

• film-gex

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •2•3•0•0•Updated Oct 23, 2020Oct 23, 2020

• policy

  Public
  Core lab policies

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Jul 25, 2020Jul 25, 2020

• rcav

  Public
  'Robust Semantic Interpretability: Revisiting Concept Activation Vectors' Official Implementation

  Python

  •0•11•0•0•Updated Jul 15, 2020Jul 15, 2020

• plaquebox-paper

  Public
  Repo for Tang et al, bioRxiv 454793 (2018)

  machine-learningdeep-learningconvolutional-neural-networks+ 10immunohistochemical-imagesalzheimers-diseasedementiasaliency-mappathologymedical-image-analysisplaques+ 3

  Jupyter Notebook

  •

  MIT License

  •25•39•2•0•Updated Mar 24, 2019Mar 24, 2019

• keras-neural-graph-fingerprint

  Public
  Keras implementation of Neural Graph Fingerprints as proposed by Duvenaud et al., 2015

  graphgraph-algorithmsgpu+ 8kerasneural-networksdifferentiable-modelsmorgan-fingerprintsatommoleculefingerprint+ 1

  Python

  •

  MIT License

  •22•46•5•2•Updated Jan 25, 2019Jan 25, 2019

• comments

  Public
  Jupyter Notebook

  •

  MIT License

  •1•12•0•0•Updated Apr 12, 2018Apr 12, 2018

• conda-recipes

  Public
  Creative Commons Attribution Share Alike 4.0 International

  •0•0•0•0•Updated Oct 18, 2017Oct 18, 2017

• python_utilities

  Public
  Useful tools for common Python tasks.

  Python

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Sep 23, 2015Sep 23, 2015