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The following warning raised by antimeridian.fix_shape for this dataset seems to yield some insight:
FixWindingWarning: The exterior ring of this shape is wound clockwise. Since this is a common error in real-world geometries, this package is reversing the exterior coordinates of the input shape before running its algorithm. If you know that your input shape is correct (i.e. if your data encompasses both poles), pass fix_winding=False.
Subsequently, crs.valid_region.intersects(geo_extent) is False, so no dataset spatial values can be generated and the spatial index entry doesn't get updated. With fix_winding=True, an intersection is found.
Set up datacube:
Index one document:
Check postgres:
SELECT * from odc.spatial_3832;
Run
datacube spindex update 3832
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