@@ -54,30 +54,58 @@ exts_list = [
5454 'checksums' : ['4cd9a63b3b41b08fca8121dc5b8f43d6f7d580842b1b000055dee90b68f49982' ],
5555 }),
5656 ('gsl' , '2.1-8' , {
57- 'installopts' : "--configure-args='--with-gsl=${EBROOTGSL} --enable-bundled-gsl=false'" ,
57+ 'installopts' : "--configure-args='--with-gsl=${EBROOTGSL} --enable-bundled-gsl=false'" ,
58+ 'checksums' : ['f33609bf485abd190e65ff5d0fdab438b759294c47b921d983d89d6f053a2d95' ],
59+ }),
60+ ('boot' , '1.3-31' , {
61+ 'checksums' : ['d8542e8cd1b503ca412e774908f386c0522a991296d57560ebded0f3d201c8d2' ],
62+ }),
63+ ('matrixStats' , '1.4.1' , {
64+ 'checksums' : ['ac6d65cab6ca30926f35bc3bc59b869946ae92e4738ceca90fad6620fc6ecd10' ],
5865 }),
59- ('boot' , '1.3-31' ),
60- ('matrixStats' , '1.4.1' ),
6166 ('MatrixGenerics' , '1.14.0' , {
6267 'checksums' : ['8da491661e8581adf1f2f8c5d2f46272d92b6c5a639bf4a80140c05e5694a593' ],
6368 }),
64- ('lattice' , '0.22-6' ),
65- ('Matrix' , '1.6-5' ),
66- ('generics' , '0.1.3' ),
67- ('findpython' , '1.0.9' ),
68- ('R6' , '2.5.1' ),
69- ('jsonlite' , '1.8.9' ),
70- ('argparse' , '2.2.5' ),
71- ('gtable' , '0.3.6' ),
72- ## ('isoband', '0.2.7'),
73- ('MASS' , '7.3-59' ),
74- ('nlme' , '3.1-167' ),
75- ## ('mgcv', '1.9-1'),
76- ## ('scales', '1.3.0'),
77- ('tibble' , '3.2.1' ),
78- ('vctrs' , '0.6.5' ),
79- ('withr' , '3.0.2' ),
80- ('RColorBrewer' , '1.1-3' , {
69+ ('lattice' , '0.22-6' , {
70+ 'checksums' : ['4b377211e472ece7872b9d6759f9b9c660b09594500462eb6146312a1d4d00f7' ],
71+ }),
72+ ('Matrix' , '1.6-5' , {
73+ 'checksums' : ['726c8d46626e73d1d6e76a74679813c6df96ffdee1aee45d94e7014cb4ceb97d' ],
74+ }),
75+ ('generics' , '0.1.3' , {
76+ 'checksums' : ['75046163bfa8b8a4f4214c1b689e796207f6447182f2e5062cf570302387d053' ],
77+ }),
78+ ('findpython' , '1.0.9' , {
79+ 'checksums' : ['b6a15e0cdfcdd4b1cfc76f7e4eaad0125d4d52889711200075280e9b2a2cb7cb' ],
80+ }),
81+ ('R6' , '2.5.1' , {
82+ 'checksums' : ['8d92bd29c2ed7bf15f2778618ffe4a95556193d21d8431a7f75e7e5fc102bf48' ],
83+ }),
84+ ('jsonlite' , '1.8.9' , {
85+ 'checksums' : ['89f130e0e1163328c01decd54e7712b5ebf3d0a667da0052833722cb9a6e90b0' ],
86+ }),
87+ ('argparse' , '2.2.5' , {
88+ 'checksums' : ['53c8a9eb51041084eb3d9c271b14ebcb32dc2f50cf16afa5c54c504a97229ea4' ],
89+ }),
90+ ('gtable' , '0.3.6' , {
91+ 'checksums' : ['d305a5fa11278b649d2d8edc5288bf28009be888a42be58ff8714018e49de0ef' ],
92+ }),
93+ ('MASS' , '7.3-59' , {
94+ 'checksums' : ['454200bec7a52835fbb7f9fe8e01a7aaa728b3ab87b068fc6d900e01c930da5a' ],
95+ }),
96+ ('nlme' , '3.1-167' , {
97+ 'checksums' : ['dadc9ccb9b2089a533547437edd256a29a0e059365f11a81e7390bf48f2a8a49' ],
98+ }),
99+ ('tibble' , '3.2.1' , {
100+ 'checksums' : ['65a72d0c557fd6e7c510d150c935ed6ced5db7d05fc20236b370f11428372131' ],
101+ }),
102+ ('vctrs' , '0.6.5' , {
103+ 'checksums' : ['43167d2248fd699594044b5c8f1dbb7ed163f2d64761e08ba805b04e7ec8e402' ],
104+ }),
105+ ('withr' , '3.0.2' , {
106+ 'checksums' : ['0a3a05f493d275cca4bf13c8c1b95a1a4eed7f83b2493f41fde02ce3fc92c1a3' ],
107+ }),
108+ ('RColorBrewer' , '1.1-3' , {
81109 'checksums' : ['4f42f5423c45688b39f492c7892d93f37b4541831c8ffb140364d2bd89031ac0' ],
82110 }),
83111 ('png' , '0.1-8' , {
@@ -147,20 +175,10 @@ exts_list = [
147175 'checksums' : ['7c58b424f99b3634038e6f6d1fe4b0241b8aecb50e9c50466d5590f7e3144721' ],
148176 }),
149177 ('Rhdf5lib' , '1.24.1' , {
150- ## 'patches': ['Rhdf5lib-1.20.0_fix_hardcoded_path_to_mv.patch'],
151- ## 'checksums': [
152- ## {'Rhdf5lib_1.24.1.tar.gz': '90eb76a2f6b73e18c8fb560ab14e5e3a2c85ae747f278d66e67d3bebfe6c6551'},
153- ## {'Rhdf5lib-1.20.0_fix_hardcoded_path_to_mv.patch':
154- ## 'fd35fd20166aa67cf5fbc194861d9196a2220fd40057b0524722ecc3de4774e8'},
155- ## ],
178+ 'checksums' : ['90eb76a2f6b73e18c8fb560ab14e5e3a2c85ae747f278d66e67d3bebfe6c6551' ],
156179 }),
157180 ('RProtoBufLib' , '2.14.0' , {
158- ## 'patches': ['RProtoBufLib-2.8.0_fix-protobuf-build.patch'],
159- ## 'checksums': [
160- ## {'RProtoBufLib_2.14.0.tar.gz': 'd8c0c6ced9ea9bb661288697fbbdb1ffb754dd8d2af85132b039fbe666242ac4'},
161- ## {'RProtoBufLib-2.8.0_fix-protobuf-build.patch':
162- ## '8775d74e2288000c57575f4ef45a875b4a377ac02f89efa947699ea786bedf64'},
163- ## ],
181+ 'checksums' : ['d8c0c6ced9ea9bb661288697fbbdb1ffb754dd8d2af85132b039fbe666242ac4' ],
164182 }),
165183 ('BH' , '1.84.0-0' , {
166184 'checksums' : ['6fb660755f572cd975073d7052075654acf8db12d208954ca223b8e4f77ef1ac' ],
@@ -171,37 +189,54 @@ exts_list = [
171189 ('flowCore' , '2.14.0' , {
172190 'checksums' : ['6d21a43022eb6de907fdc025116bccacbf2ee997c5cf7ad96d0f70fa6d605185' ],
173191 }),
174- ('cluster' , '2.1.8' ),
175- ('graph' , '1.84.1' ),
176- ('mclust' , '6.1.1' ),
192+ ('cluster' , '2.1.8' , {
193+ 'checksums' : ['c32a462e34694c99d58da953efa74882b5427f8c5db7cb226ae15c54ce6060ca' ],
194+ }),
195+ ('graph' , '1.84.1' , {
196+ 'checksums' : ['cd2a91c93c81c09d9c59853c417e8a9cdde39b0589bacdce4ca916b6ee5f45a7' ],
197+ }),
198+ ('mclust' , '6.1.1' , {
199+ 'checksums' : ['ddd7018e5e6ea7f92c7fc9872b391491b7e91c2cd89ef1dcaf4408afb5116775' ],
200+ }),
177201 ('flowClust' , '3.40.0' , {
178202 'installopts' : "--configure-args='--with-gsl=${EBROOTGSL} --enable-bundled-gsl=false'" ,
179203 'checksums' : ['7e699b06e378e32144704dbec18289109980b0f5eca166180f2c30007b83e0f5' ],
180204 }),
181205 ('energy' , '1.7-12' , {
182- 'installopts' : "--configure-args='--with-gsl=${EBROOTGSL} --enable-bundled-gsl=false'" ,
206+ 'installopts' : "--configure-args='--with-gsl=${EBROOTGSL} --enable-bundled-gsl=false'" ,
207+ 'checksums' : ['ac2224befa4c6ab62f99816ff670b1ee35288cabb7db362257e9af21c87e6f72' ],
208+ }),
209+ ('dbscan' , '1.2.2' , {
210+ 'checksums' : ['0c3abdd122521d9be8cbdb3589a91a18ef18a3d00493fdb140fd932bae0fe343' ],
183211 }),
184- ('dbscan' , '1.2.2' ),
185212 ('pixmap' , '0.4-13' , {
186213 'checksums' : ['e3dbc641a0497575b45a4140dadc6bf43cdf39b02393f93f1b0ee4f4d026e711' ],
187214 }),
188215 ('sp' , '2.1-4' , {
189216 'checksums' : ['e185e7fb61d2d7dbc50fd765a93e170fa778083a653588db1f5e99d019479f0a' ],
190217 }),
191- ('pracma' , '2.4.4' ),
218+ ('pracma' , '2.4.4' , {
219+ 'checksums' : ['1a4ef3af2197f999dbaa614bf5a70f09ec463d8c91feb5aa0d995de24ec6ba7f' ],
220+ }),
192221 ('RcppArmadillo' , '14.0.2-1' , {
193- 'checksums' : ['e0755c37f1a70c4509df2a8f773db11418d9758ff81993f096f913d2116e04f5' ],
222+ 'checksums' : ['9b728aab93f04a46891208ee0f15824a69fe5f91f6108d0d23101a98450c46f9' ],
223+ }),
224+ ('DataVisualizations' , '1.3.3' , {
225+ 'checksums' : ['b737db909b5650044852db0d6ac67bff207ed03a7952708c8dd704dda4d1bef3' ],
226+ }),
227+ ('protoclust' , '1.6.4' , {
228+ 'checksums' : ['4177a045dcfefabb842b11cf7d23c503fdd4d807877e1677f9440ad6ba4c7431' ],
229+ }),
230+ ('FCPS' , version , {
231+ 'checksums' : ['d1e5e06700a81fe529f52ef1f65977d3c786f33df262f4f89238d2622dc7ba97' ],
194232 }),
195- ('DataVisualizations' , '1.3.3' ),
196- ('FCPS' , '1.3.4' ),
197-
198233]
199234
200235modextrapaths = {'R_LIBS_SITE' : '' }
201236
202237sanity_check_paths = {
203238 'files' : [],
204- 'dirs' : ['FCPS' , 'dbscan' , 'energy' ],
239+ 'dirs' : ['FCPS' , 'dbscan' , 'energy' , 'protoclust' ],
205240}
206241
207242moduleclass = 'bio'
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