- Bump logback dependencies to
ch.qos.logback:logback-core:1.2.9
andch.qos.logback:logback-classic:1.2.9
(#160) - Bump ome-common dependency to
org.openmicroscopy:ome-common:6.0.9
- Update link to TIFF standard (#157)
- Add XSLT transformations page (#154)
- Add reference to javadoc.io (#153)
- Add JDK17 to the GitHub workflows testing matrix (#159)
- ome_model: add support for setting physical sizes and units #151
- Exclude external link failing the linkcheck #150
- 2008-09 to 2009-09 XSLT transforms: Fix loss of CustomAttributes #145
- MetadataConverter: Fix dropping of WellAnnotationRefs during conversion #131
- ome_model: do not use mutable default arguments #149
- Dependencies: bump ome-common to 6.0.7 and logback-classic/logback-core to 1.2.0
- Remove legacy Appveyor configuration #148
- Exclude broken links to www.fei.com #141
- OMEModelImpl: do not permit the addition of null references #125
- Fix external reference to XML validator #137
- Switch to GitHub workflows
- Python 3.9 support: upgrade to Genshi 0.7.5 and consume upstream package #127 #138
- Fix PyPI deployment #124
- Allow version introspection #123
- Add support for population of plane metadata #122
- Ensure stdout works in Jupyter Notebooks #121
- Make channel names and color optional #120
- Fix links to external resources #116 #118
- Add HCS companion fileset to the OME-TIFF sample data page #117
- Update code-generation for building on Python 3.6, 3.7 #65
- Add support for Python 3.8 and make code-generation Python 3 only #105
- Uncap Sphinx version #109
- Add getters and setters for OME@Creator attribute for ome.xml.metadata interfaces and implementations #108
- Remove unmaintained C++ OME-XML implementation #111
- Fix cyclic dependency between specification and ome-xml modules #101
- Add sub-resolution support to the OME-TIFF specification #98
- Add references to public OME-TIFF sub-resolution sample datasets #99
- Documentation and linkchecker improvements #70 #76 #83 #94
- Require JDK 8 as the minimum version 90 95
- MetadaConverter: add API for copying Channel metadata #88
- Add createRotationTransform static method to AffineTransform #77
- Build system: update Maven plugin versions #74
- Aggregate generated C++ source files for model and enums #79
- Require C++ 14 support #76
- Add createRotationTransform static method to AffineTransform #77
- Report numerical value domain errors more clearly #68
Documentation updates:
- Update documentation links to use new docs.openmicroscopy.org URLs #61
- Clarify and update OME-XML documentation, including removing references to OME-XML as a data model #64
- Fix Leica Microsystems URL #63 #66
- Use C++11
<thread>
and<mutex>
#45 - Re-add support for Boost 1.53 #51
- Add support for Boost 1.65.1 #52
- Update CMake requirements to 3.4 #49
- CMake: use CMP0067 to enable standard setting in feature tests #47
- CMake: remove REQUIRED from exported configuration #54
- CMake: remove find modules distributed with CMake #59
Documentation updates:
- Update OME website URLs and copyright years #48
- Add versioning note and update README #50
- Add OMERO pyramid specification to the documentation #55
- Fix miscellaneous links #56 #57 #58 #60
- CMake: move options inclusion after project call #42
Documentation updates:
- Use new OME Sphinx theme #44
- xsd-fu: correct C++ model object template #41
Documentation updates:
- Use master as the source branch #40
Released as 5.5.6
- Update OME-XML API reference including use of deleted methods #38
- CMake: use C++ standard variable as documented #39
Documentation updates:
- Fix BigTIFF links #34
Documentation updates:
- Add documentation links to the README #32
- Reorganize OME-TIFF samples #31
- Add BBBC and MitoCheck datasets to the OME-TIFF samples page #33
- OME-XML C++: insert missing links #30
- Enable C++ 11 support #10
- Add minimal C++ 11 features #25
- OME-XML performance improvements #28
- CMake: obtain release version from Maven #29