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header.php
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<!doctype html>
<html lang="en">
<?php
if (file_exists($_SERVER['DOCUMENT_ROOT']."/easy_gdb/configuration_path.php") ) {
include_once($_SERVER['DOCUMENT_ROOT']."/easy_gdb/configuration_path.php");
} elseif (file_exists($_SERVER['DOCUMENT_ROOT']."/configuration_path.php") ) {
include_once($_SERVER['DOCUMENT_ROOT']."/configuration_path.php");
}
include_once "$conf_path/easyGDB_conf.php";
?>
<head>
<title><?php echo "$dbTitle";?></title>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<link rel="icon" href=<?php echo "$images_path/favicon.ico";?>>
<!-- compiled and minified CSS -->
<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/4.5.2/css/bootstrap.min.css">
<link rel="stylesheet" href="/easy_gdb/css/easy_gdb.css">
<link rel="stylesheet" href="/easy_gdb/css/loading_datatable.css">
<?php
if ($custom_css_path && file_exists("$root_path/$custom_css_path")) {
echo "<link rel=\"stylesheet\" href=\"/$custom_css_path\">";
}
?>
<link rel="stylesheet" href="https://cdn.datatables.net/1.10.24/css/dataTables.bootstrap4.min.css">
<link rel="stylesheet" href="https://cdn.datatables.net/buttons/1.6.4/css/buttons.bootstrap4.min.css">
<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/colreorder/1.5.5/css/colReorder.dataTables.min.css">
<!-- jQuery library -->
<script src="https://ajax.googleapis.com/ajax/libs/jquery/3.5.1/jquery.min.js"></script>
<!-- Popper JS -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/popper.js/1.16.0/umd/popper.min.js"></script>
<!-- compiled JavaScript -->
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/4.5.2/js/bootstrap.min.js"></script>
<script src="/easy_gdb/js/download2.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.10.24/js/jquery.dataTables.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.10.24/js/dataTables.bootstrap4.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/colreorder/1.5.5/js/dataTables.colReorder.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/buttons/1.6.4/js/dataTables.buttons.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/buttons/1.6.4/js/buttons.bootstrap4.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/buttons/1.6.4/js/buttons.colVis.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/buttons/1.6.4/js/buttons.html5.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/buttons/1.6.4/js/buttons.print.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdnjs.cloudflare.com/ajax/libs/pdfmake/0.1.53/pdfmake.min.js"></script>
<script type="text/javascript" charset="utf8" src="https://cdnjs.cloudflare.com/ajax/libs/pdfmake/0.1.53/vfs_fonts.js"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/jszip/3.1.3/jszip.min.js" type="text/javascript"></script>
<link rel="stylesheet" href="https://use.fontawesome.com/releases/v5.7.0/css/all.css" integrity="sha384-lZN37f5QGtY3VHgisS14W3ExzMWZxybE1SJSEsQp9S+oqd12jhcu+A56Ebc1zFSJ" crossorigin="anonymous">
</head>
<body>
<?php
if ($header_img) {
echo "<div class=\"container-fluid easygdb-top\">";
echo "<div style=\"background: url($images_path/$header_img) left bottom; background-size:cover;\">";
echo "<img class=\"cover-img\" src=$images_path/$header_img style=\"visibility: hidden;\"/>";
echo "</div>";
echo "</div>";
}
?>
<?php include_once 'toolbar.php';?>
<div class="page_container">
<div id="jb_cookies_Modal" class="modal fade" role="dialog">
<div class="modal-dialog">
<!-- Modal content-->
<div class="modal-content">
<div class="modal-header">
<button type="button" class="close" data-dismiss="modal">×</button>
<h4 class="modal-title">Cookies policy</h4>
</div>
<div class="modal-body">
<p>
Jbrowse uses cookies to remember your configuration in the genome browser, such as track load and position.
When using Jbrowse in this site you accept the use of these cookies.
</p>
</div>
<div class="modal-footer">
<a id="jb_ok_cookies" href="/jbrowse/" target="_blank" type="button" class="btn btn-default">OK</a>
</div>
</div>
</div>
</div>
<script>
jQuery(document).ready(function() {
var jb_link = "/jbrowse/";
$(".jbrowse_link").click(function(event){
event.preventDefault();
jb_link = $(this).attr('href');
$("#jb_ok_cookies").attr('href', jb_link);
$("#jb_cookies_Modal").modal();
});
$("#jb_ok_cookies").click(function(event){
$("#jb_cookies_Modal").modal("hide");
});
});
</script>
<style>
.cover-img {
height: 277px;
width:20px;
overflow: hidden;
}
.cover-title {
position: absolute;
padding:10px;
margin-top:200px;
font-size: 24px;
color:#fff;
width: 50%;
background: black; /* For browsers that do not support gradients */
background-color: rgba(0, 0, 0, 0.5);
background: -webkit-linear-gradient(left, rgba(0, 0, 0, 0.8) , rgba(0, 0, 0, 0)); /* For Safari 5.1 to 6.0 */
background: -o-linear-gradient(right, rgba(0, 0, 0, 0.8), rgba(0, 0, 0, 0)); /* For Opera 11.1 to 12.0 */
background: -moz-linear-gradient(right, rgba(0, 0, 0, 0.8), rgba(0, 0, 0, 0)); /* For Firefox 3.6 to 15 */
background: linear-gradient(to right, rgba(0, 0, 0, 0.8) , rgba(0, 0, 0, 0)); /* Standard syntax */
}
.easygdb-top {
background-color: #a7d0e5;
width: 100%;
height: 277px;
padding:0px
}
.institution_logo3 {
right:0px;
position:absolute;
top:75px;
}
.img-rounded-5 {
border-radius: 5px;
margin:10px;
}
</style>