Closed
Description
Was surprised to find that fmriprep provides its own $HOME
, which is I guess a good thing in general although interferes with my "reproducible interactive shell session" effort in ReproNim/containers#9 .
But that HOME comes with npm caches etc which I guess are not needed and could be safely removed?
yoh@smaug:~$ ls -lta
total 6
drwxr-xr-x 1 root root 60 May 22 18:59 ..
drwxrwxrwx 7 root root 159 May 22 17:40 .
drwxrwxrwx 3 root root 51 May 22 17:40 .conda
drwxrwxrwx 4 root root 79 May 22 17:40 .npm
drwxrwxrwx 4 root root 56 May 15 21:01 .cache
drwxrwxrwx 4 root root 52 May 15 21:01 .config
drwxrwxrwx 2 root root 3 May 4 23:26 .empty
-rw-rw-rw- 1 root root 655 Jun 24 2016 .profile
-rw-rw-rw- 1 root root 220 Aug 31 2015 .bash_logout
-rw-rw-rw- 1 root root 3771 Aug 31 2015 .bashrc
yoh@smaug:~$ find | nl | tail
2220 ./.npm/_cacache/index-v5/ff/48
2221 ./.npm/_cacache/index-v5/ff/48/5e30648e089b4166b1a323ec42c2a63a71a338904b4b7469fe1edf540ccf
2222 ./.npm/_cacache/index-v5/ff/91
2223 ./.npm/_cacache/index-v5/ff/91/9d656f6de7d20eb4cb7872af9b8d6c7ec9acd113d2b5375d6b17036c0852
2224 ./.npm/_cacache/index-v5/ff/d3
2225 ./.npm/_cacache/index-v5/ff/d3/eca629ba696cac5a91e13f61bb768d7cbf82072f798d17071572ab3943f2
2226 ./.npm/_cacache/tmp
2227 ./.npm/_locks
2228 ./.npm/anonymous-cli-metrics.json
2229 ./.profile
yoh@smaug:~$ du -scm .
34 .
34 total
yoh@smaug:~$ fmriprep --version
fmriprep v1.4.0
this is within singularity image from https://www.singularity-hub.org/collections/2761