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freesurfer7.3.2-exclude.txt
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freesurfer/average/711-2B_as_mni_average_305.4dfp.hdr
freesurfer/average/711-2B_as_mni_average_305.4dfp.ifh
freesurfer/average/711-2B_as_mni_average_305.4dfp.img
freesurfer/average/711-2B_as_mni_average_305.4dfp.img.rec
freesurfer/average/711-2B_as_mni_average_305_mask.4dfp.hdr
freesurfer/average/711-2B_as_mni_average_305_mask.4dfp.img.rec
freesurfer/average/711-2C_as_mni_average_305.4dfp.hdr
freesurfer/average/711-2C_as_mni_average_305.4dfp.img.rec
freesurfer/average/711-2C_as_mni_average_305.4dfp.mat
freesurfer/average/aseg+spmhead+vermis+pons.ixi.gca
freesurfer/average/BrainstemSS
freesurfer/average/Buckner_JNeurophysiol11_MNI152
freesurfer/average/Choi_JNeurophysiol12_MNI152
freesurfer/average/colortable_desikan_killiany.txt
freesurfer/average/face.gca
freesurfer/average/HippoSF
freesurfer/average/label_scales.dat
freesurfer/average/lh.atlas2002_simple.gcs
freesurfer/average/lh.atlas2005_simple.gcs
freesurfer/average/lh.average.curvature.filled.buckner40.tif
freesurfer/average/lh.average.CURVATURE.tif
freesurfer/average/lh.average.tif
freesurfer/average/lh.curvature.buckner40.filled.desikan_killiany.2010-03-25.gcs
freesurfer/average/lh.destrieux.simple.2009-07-29.gcs
freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2020-05-13.gcs
freesurfer/average/lh.DKTatlas100.gcs
freesurfer/average/lh.DKTatlas40.gcs
freesurfer/average/lh_trans_toSulc.gcs
freesurfer/average/mideface-atlas
freesurfer/average/mni152.mni305.cor.subfov1.dat
freesurfer/average/mni152.mni305.cor.subfov2.dat
freesurfer/average/mni152.register.dat
freesurfer/average/mni305.cor.readme
freesurfer/average/mni305.cor.subfov1.mgz
freesurfer/average/mni305.cor.subfov1.reg
freesurfer/average/mni305.cor.subfov2.mgz
freesurfer/average/mni305.cor.subfov2.reg
freesurfer/average/mni305.mask.cor.mgz
freesurfer/average/mni_average_305.4dfp.hdr
freesurfer/average/mni_average_305.4dfp.ifh
freesurfer/average/mni_average_305.4dfp.img
freesurfer/average/mni_average_305.4dfp.img.rec
freesurfer/average/mult-comp-cor
freesurfer/average/pons.mni152.2mm.mgz
freesurfer/average/RB_all_2008-03-26.mni152.2mm.lta
freesurfer/average/RB_all_2016-05-10.vc700.gca
freesurfer/average/RB_all_2019_10_25.talxfm.mni305.gca
freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca
freesurfer/average/RB_all_withskull_2019_10_22.talxfm.mni305.gca
freesurfer/average/rh.atlas2002_simple.gcs
freesurfer/average/rh.atlas2005_simple.gcs
freesurfer/average/rh.average.curvature.filled.buckner40.tif
freesurfer/average/rh.average.CURVATURE.tif
freesurfer/average/rh.average.tif
freesurfer/average/rh.curvature.buckner40.filled.desikan_killiany.2010-03-25.gcs
freesurfer/average/rh.destrieux.simple.2009-07-29.gcs
freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2020-05-13.gcs
freesurfer/average/rh.DKTatlas100.gcs
freesurfer/average/rh.DKTatlas40.gcs
freesurfer/average/rh_trans_toSulc.gcs
freesurfer/average/RLB700_atlas_as_orig.4dfp.hdr
freesurfer/average/RLB700_atlas_as_orig.4dfp.ifh
freesurfer/average/RLB700_atlas_as_orig.4dfp.img
freesurfer/average/RLB700_atlas_as_orig.4dfp.img.rec
freesurfer/average/samseg
freesurfer/average/surf
freesurfer/average/SVIP_Adult_Comp_N24_as_orig.4dfp.hdr
freesurfer/average/SVIP_Adult_Comp_N24_as_orig.4dfp.ifh
freesurfer/average/SVIP_Adult_Comp_N24_as_orig.4dfp.img
freesurfer/average/SVIP_Adult_Comp_N24_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Adult_Control_N12_as_orig.4dfp.hdr
freesurfer/average/SVIP_Adult_Control_N12_as_orig.4dfp.ifh
freesurfer/average/SVIP_Adult_Control_N12_as_orig.4dfp.img
freesurfer/average/SVIP_Adult_Control_N12_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Adult_Patient_N12_as_orig.4dfp.hdr
freesurfer/average/SVIP_Adult_Patient_N12_as_orig.4dfp.ifh
freesurfer/average/SVIP_Adult_Patient_N12_as_orig.4dfp.img
freesurfer/average/SVIP_Adult_Patient_N12_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Child_Comp_N24_as_orig.4dfp.hdr
freesurfer/average/SVIP_Child_Comp_N24_as_orig.4dfp.ifh
freesurfer/average/SVIP_Child_Comp_N24_as_orig.4dfp.img
freesurfer/average/SVIP_Child_Comp_N24_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Full_Comp_N48_as_orig.4dfp.hdr
freesurfer/average/SVIP_Full_Comp_N48_as_orig.4dfp.ifh
freesurfer/average/SVIP_Full_Comp_N48_as_orig.4dfp.img
freesurfer/average/SVIP_Full_Comp_N48_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Young_Control_N12_as_orig.4dfp.hdr
freesurfer/average/SVIP_Young_Control_N12_as_orig.4dfp.ifh
freesurfer/average/SVIP_Young_Control_N12_as_orig.4dfp.img
freesurfer/average/SVIP_Young_Control_N12_as_orig.4dfp.img.rec
freesurfer/average/SVIP_Young_Patient_N12_as_orig.4dfp.hdr
freesurfer/average/SVIP_Young_Patient_N12_as_orig.4dfp.ifh
freesurfer/average/SVIP_Young_Patient_N12_as_orig.4dfp.img
freesurfer/average/SVIP_Young_Patient_N12_as_orig.4dfp.img.rec
freesurfer/average/talairach_mixed_with_skull.gca
freesurfer/average/ThalamicNuclei
freesurfer/average/tissue_parms.txt
freesurfer/average/wmsa_new_eesmith.gca
freesurfer/average/Yeo_Brainmap_MNI152
freesurfer/average/Yeo_JNeurophysiol11_MNI152
freesurfer/bin/3dvolreg.afni
freesurfer/bin/4dfptoanalyze
freesurfer/bin/anatomiCutsUtils
freesurfer/bin/annot2std
freesurfer/bin/aparc2feat
freesurfer/bin/aparcstats2table
freesurfer/bin/aparc_stats_aseg
freesurfer/bin/aparcstatsdiff
freesurfer/bin/apas2aseg
freesurfer/bin/applyMorph
freesurfer/bin/aseg2feat
freesurfer/bin/asegstats2table
freesurfer/bin/asegstatsdiff
freesurfer/bin/bblabel
freesurfer/bin/bbmask
freesurfer/bin/bedpostx_mgh
freesurfer/bin/beta2sxa
freesurfer/bin/bet.fsl
freesurfer/bin/biasfield
freesurfer/bin/bmedits2surf
freesurfer/bin/brec
freesurfer/bin/brec.awk
freesurfer/bin/browse-minc-header.tcl
freesurfer/bin/bugr
freesurfer/bin/build_desikan_killiany_gcs.csh
freesurfer/bin/cblumwmgyri
freesurfer/bin/checkMCR.sh
freesurfer/bin/check_recons.sh
freesurfer/bin/check_siemens_dir
freesurfer/bin/check_subject
freesurfer/bin/clear_fs_env.csh
freesurfer/bin/compute_interrater_variability.csh
freesurfer/bin/compute_label_vals.csh
freesurfer/bin/compute_label_volumes.csh
freesurfer/bin/connectgraph
freesurfer/bin/cor_to_minc
freesurfer/bin/cp-dicom
freesurfer/bin/createMorph
freesurfer/bin/csvprint
freesurfer/bin/dcmdir-info-mgh
freesurfer/bin/dcmdjpeg.fs
freesurfer/bin/dcmdrle.fs
freesurfer/bin/dcmsplit
freesurfer/bin/dcmunpack
freesurfer/bin/deface_subject
freesurfer/bin/defect-seg
freesurfer/bin/dicom-rename
freesurfer/bin/diffusionUtils
freesurfer/bin/dmri_ac.sh
freesurfer/bin/dmri_AnatomiCuts
freesurfer/bin/dmri_bset
freesurfer/bin/dmri_coloredFA
freesurfer/bin/dmri_extractSurfaceMeasurements
freesurfer/bin/dmri_forrest
freesurfer/bin/dmri_group
freesurfer/bin/dmri_groupByEndpoints
freesurfer/bin/dmri_match
freesurfer/bin/dmri_mergepaths
freesurfer/bin/dmri_motion
freesurfer/bin/dmri_neighboringRegions
freesurfer/bin/dmri_paths
freesurfer/bin/dmri_pathstats
freesurfer/bin/dmri_projectEndPoints
freesurfer/bin/dmrirc.example
freesurfer/bin/dmrirc.long.example
freesurfer/bin/dmrirc.long.multiscan.example
freesurfer/bin/dmrirc.multiscan.example
freesurfer/bin/dmri_saveHistograms
freesurfer/bin/dmri_spline
freesurfer/bin/dmri_stats_ac
freesurfer/bin/dmri_tensoreig
freesurfer/bin/dmri_train
freesurfer/bin/dmri_trk2trk
freesurfer/bin/dmri_violinPlots
freesurfer/bin/dmri_vox2vox
freesurfer/bin/dt_recon
freesurfer/bin/epidewarp.fsl
freesurfer/bin/exportGcam
freesurfer/bin/feat2segstats
freesurfer/bin/feat2surf
freesurfer/bin/findsession
freesurfer/bin/fix_subject
freesurfer/bin/fix_subject_corrected
freesurfer/bin/fix_subject_corrected-lh
freesurfer/bin/fix_subject_corrected-rh
freesurfer/bin/fix_subject-lh
freesurfer/bin/fix_subject_on_seychelles
freesurfer/bin/fix_subject-rh
freesurfer/bin/fixup_mni_paths
freesurfer/bin/flip_4dfp
freesurfer/bin/flirt.fsl
freesurfer/bin/flirt.newdefault.20080811.sch
freesurfer/bin/fname2ext
freesurfer/bin/fname2stem
freesurfer/bin/freesurfer
freesurfer/bin/freeview
freesurfer/bin/fscalc
freesurfer/bin/fscalc.fsl
freesurfer/bin/fsdcmdecompress
freesurfer/bin/fsfget
freesurfer/bin/fsfirst.fsl
freesurfer/bin/fs_install_mcr
freesurfer/bin/fsl.5.0.2.xyztrans.sch
freesurfer/bin/fs_lib_check
freesurfer/bin/fsl_label2voxel
freesurfer/bin/fslmaths.fsl
freesurfer/bin/fslorient.fsl
freesurfer/bin/fslregister
freesurfer/bin/fsl_rigid_register
freesurfer/bin/fsl_sub_mgh
freesurfer/bin/fslswapdim.fsl
freesurfer/bin/fspalm
freesurfer/bin/fsPrintHelp
freesurfer/bin/fsr-coreg
freesurfer/bin/fsr-import
freesurfer/bin/fs_run_from_mcr
freesurfer/bin/fs_spmreg.glnxa64
freesurfer/bin/fs_tutorial_data
freesurfer/bin/fs_update
freesurfer/bin/fsvglrun
freesurfer/bin/fvcompare
freesurfer/bin/gca-apply
freesurfer/bin/gcainit
freesurfer/bin/gcaprepone
freesurfer/bin/gcatrain
freesurfer/bin/gcatrainskull
freesurfer/bin/gdcmconv.fs
freesurfer/bin/gems_compute_binary_atlas_probs
freesurfer/bin/get_label_thickness
freesurfer/bin/groupstats
freesurfer/bin/groupstatsdiff
freesurfer/bin/gtmseg
freesurfer/bin/help_xml_validate
freesurfer/bin/hiam_make_surfaces
freesurfer/bin/hiam_make_template
freesurfer/bin/hiam_register
freesurfer/bin/histo_compute_joint_density
freesurfer/bin/histo_fix_topology
freesurfer/bin/histo_register_block
freesurfer/bin/histo_segment
freesurfer/bin/histo_synthesize
freesurfer/bin/ico_supersample
freesurfer/bin/id.xfm
freesurfer/bin/inflate_subject
freesurfer/bin/inflate_subject3
freesurfer/bin/inflate_subject-lh
freesurfer/bin/inflate_subject_new
freesurfer/bin/inflate_subject_new-lh
freesurfer/bin/inflate_subject_new-rh
freesurfer/bin/inflate_subject-rh
freesurfer/bin/inflate_subject_sc
freesurfer/bin/irepifitvol
freesurfer/bin/irepifitvol.glnx64
freesurfer/bin/isanalyze
freesurfer/bin/isnifti
freesurfer/bin/isolate_labels.csh
freesurfer/bin/isolate_labels_keeporigval.csh
freesurfer/bin/is-surface
freesurfer/bin/jkgcatrain
freesurfer/bin/label2flat
freesurfer/bin/label2patch
freesurfer/bin/label_area
freesurfer/bin/label_border
freesurfer/bin/label_child
freesurfer/bin/label_elderly_subject
freesurfer/bin/labels_disjoint
freesurfer/bin/labels_intersect
freesurfer/bin/label_subject
freesurfer/bin/label_subject_flash
freesurfer/bin/label_subject_mixed
freesurfer/bin/labels_union
freesurfer/bin/list_otl_labels
freesurfer/bin/listsubj
freesurfer/bin/long_create_base_sigma
freesurfer/bin/long_create_orig
freesurfer/bin/longmc
freesurfer/bin/long_mris_slopes
freesurfer/bin/long_qdec_table
freesurfer/bin/long_stats_combine
freesurfer/bin/long_stats_slopes
freesurfer/bin/long_stats_tps
freesurfer/bin/long_submit_jobs
freesurfer/bin/long_submit_postproc
freesurfer/bin/lpcregister
freesurfer/bin/lta_diff
freesurfer/bin/make_average_subcort
freesurfer/bin/make_average_subject
freesurfer/bin/make_average_surface
freesurfer/bin/make_average_volume
freesurfer/bin/make_cortex_label
freesurfer/bin/make_exvivo_filled
freesurfer/bin/make_folding_atlas
freesurfer/bin/make_hemi_mask
freesurfer/bin/make-segvol-table
freesurfer/bin/make_symmetric
freesurfer/bin/make_upright
freesurfer/bin/makevol
freesurfer/bin/map_all_labels
freesurfer/bin/map_all_labels-lh
freesurfer/bin/map_central_sulcus
freesurfer/bin/map_to_base
freesurfer/bin/meanval
freesurfer/bin/mergeseg
freesurfer/bin/merge_stats_tables
freesurfer/bin/minc2seqinfo
freesurfer/bin/mkheadsurf
freesurfer/bin/mkima_index.tcl
freesurfer/bin/mkmnc_index.tcl
freesurfer/bin/mksubjdirs
freesurfer/bin/mksurfatlas
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freesurfer/python/lib/python3.8/site-packages/caffe2
freesurfer/python/lib/python3.8/site-packages/sklearn
freesurfer/python/lib/python3.8/site-packages/tensorflow
freesurfer/python/lib/python3.8/site-packages/torch
freesurfer/python/lib/python3.8/site-packages/**/tests
freesurfer/python/**/__pycache__
freesurfer/python/share
freesurfer/SegmentNoLUT.txt
freesurfer/sessions
freesurfer/SetUpFreeSurfer.csh
freesurfer/SetUpFreeSurfer.sh
freesurfer/Simple_surface_labels2009.txt
freesurfer/sources.sh
freesurfer/subjects/bert
freesurfer/subjects/cvs_avg35
freesurfer/subjects/cvs_avg35_inMNI152
freesurfer/subjects/fsaverage3
freesurfer/subjects/fsaverage4
freesurfer/subjects/fsaverage_sym
freesurfer/subjects/lh.EC_average
freesurfer/subjects/README
freesurfer/subjects/rh.EC_average
freesurfer/subjects/sample-001.mgz
freesurfer/subjects/sample-002.mgz
freesurfer/subjects/V1_average
freesurfer/tkmeditParcColorsCMA
freesurfer/tktools
freesurfer/trctrain